RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 FAM87AP0C7U9 286 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 LIFP15018 202 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 PECAM1P16284 738 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-204ENST00000530395 NFKB1P19838 968 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 HMGCLP35914 325 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 MAGEA1P43355 309 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 HADHBP55084 474 aaKnown RBP20.59■□□□□ 0.89
SMPD1-204ENST00000530395 TFDP3Q5H9I0 405 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 ZDHHC20Q5W0Z9 365 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 PRICKLE2Q7Z3G6 844 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 GDAP1Q8TB36 358 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 HTR3CQ8WXA8 447 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 KIAA1143Q96AT1 154 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-204ENST00000530395 RTP4Q96DX8 246 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 VAT1Q99536 393 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 CTRCQ99895 268 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 FBXO8Q9NRD0 319 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 SLC23A2Q9UGH3 650 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 MYO18BQ8IUG5 2567 aa20.59■□□□□ 0.89
SMPD1-204ENST00000530395 AURKAO14965 403 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 MTX2O75431 263 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 ANKRD34CP0C6C1 535 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 MAP4P27816 1152 aaKnown RBP20.58■□□□□ 0.89
SMPD1-204ENST00000530395 CD68P34810 354 aaPredicted RBP20.58■□□□□ 0.89
SMPD1-204ENST00000530395 WNT3AP56704 352 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 WASHC5Q12768 1159 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 SEPT7Q16181 437 aaKnown RBP20.58■□□□□ 0.89
SMPD1-204ENST00000530395 TMEM26Q6ZUK4 368 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 TRAPPC5Q8IUR0 188 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 CCDC50Q8IVM0 306 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 KATNAL2Q8IYT4 538 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 NLGN4XQ8N0W4 816 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 NLGN4YQ8NFZ3 816 aaPredicted RBP20.58■□□□□ 0.89
SMPD1-204ENST00000530395 BRSK1Q8TDC3 778 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 TTC25Q96NG3 672 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 SLC12A9Q9BXP2 914 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 BPIFA1Q9NP55 256 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 HACD3Q9P035 362 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 PILRAQ9UKJ1 303 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.58■□□□□ 0.89
SMPD1-204ENST00000530395 ALG6Q9Y672 507 aa20.58■□□□□ 0.89
SMPD1-204ENST00000530395 LOC285095A0A1B0GVY8 99 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 POLR1CO15160 346 aaPredicted RBP20.57■□□□□ 0.88
SMPD1-204ENST00000530395 UBXN7O94888 489 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 ZRANB2O95218 330 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMPD1-204ENST00000530395 EPOP01588 193 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 IDSP22304 550 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 TBX2Q13207 712 aaPredicted RBP20.57■□□□□ 0.88
SMPD1-204ENST00000530395 LLGL1Q15334 1064 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 ATP13A5Q4VNC0 1218 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 SIRPB2Q5JXA9 342 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 BORAQ6PGQ7 559 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 KDELC1Q6UW63 502 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 ZC3H18Q86VM9 953 aaKnown RBP20.57■□□□□ 0.88
SMPD1-204ENST00000530395 ZNF547Q8IVP9 402 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 RCOR2Q8IZ40 523 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 RBM41Q96IZ5 413 aaKnown RBP20.57■□□□□ 0.88
SMPD1-204ENST00000530395 EFHD1Q9BUP0 239 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 ZCCHC2Q9C0B9 1178 aaKnown RBP20.57■□□□□ 0.88
SMPD1-204ENST00000530395 TRIT1Q9H3H1 467 aaKnown RBP20.57■□□□□ 0.88
SMPD1-204ENST00000530395 LUC7LQ9NQ29 371 aaKnown RBP20.57■□□□□ 0.88
SMPD1-204ENST00000530395 STARD5Q9NSY2 213 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 POT1Q9NUX5 634 aa20.57■□□□□ 0.88
SMPD1-204ENST00000530395 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMPD1-204ENST00000530395 SCHIP1Q9P0W5 487 aaPredicted RBP20.57■□□□□ 0.88
SMPD1-204ENST00000530395 hCG_1818297A0A087WSY0 165 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 ZNF891A8MT65 544 aaPredicted RBP20.56■□□□□ 0.88
SMPD1-204ENST00000530395 PPFIA2O75334 1257 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 AMD1P17707 334 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 HLA-DPA1P20036 260 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 SPAM1P38567 509 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 SLC19A1P41440 591 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 TMEM115Q12893 351 aaPredicted RBP20.56■□□□□ 0.88
SMPD1-204ENST00000530395 AGAP9Q5VTM2 703 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 ABRAXAS1Q6UWZ7 409 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 WASH2PQ6VEQ5 465 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 PID1Q7Z2X4 250 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 GLT6D1Q7Z4J2 308 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 RBM12BQ8IXT5 1001 aaKnown RBP20.56■□□□□ 0.88
SMPD1-204ENST00000530395 SLC25A41Q8N5S1 370 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 DTX3LQ8TDB6 740 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 HAUS1Q96CS2 278 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 CXorf40BQ96DE9 158 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 C9orf72Q96LT7 481 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 QKIQ96PU8 341 aaKnown RBP eCLIP20.56■□□□□ 0.88
SMPD1-204ENST00000530395 FCRL5Q96RD9 977 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 GPN2Q9H9Y4 310 aaPredicted RBP20.56■□□□□ 0.88
SMPD1-204ENST00000530395 WASH6PQ9NQA3 447 aa20.56■□□□□ 0.88
SMPD1-204ENST00000530395 ZNF624Q9P2J8 865 aaPredicted RBP20.56■□□□□ 0.88
SMPD1-204ENST00000530395 PRR19A6NJB7 356 aa20.55■□□□□ 0.88
SMPD1-204ENST00000530395 HACD1B0YJ81 288 aa20.55■□□□□ 0.88
SMPD1-204ENST00000530395 TOX3O15405 576 aaPredicted RBP20.55■□□□□ 0.88
SMPD1-204ENST00000530395 KCNJ13O60928 360 aa20.55■□□□□ 0.88
SMPD1-204ENST00000530395 STK17BO94768 372 aa20.55■□□□□ 0.88
SMPD1-204ENST00000530395 C9P02748 559 aa20.55■□□□□ 0.88
SMPD1-204ENST00000530395 TYRP1P17643 537 aa20.55■□□□□ 0.88
SMPD1-204ENST00000530395 RPL10P27635 214 aaKnown RBP20.55■□□□□ 0.88
SMPD1-204ENST00000530395 HALP42357 657 aa20.55■□□□□ 0.88
SMPD1-204ENST00000530395 GFERP55789 205 aa20.55■□□□□ 0.88
SMPD1-204ENST00000530395 MPP3Q13368 585 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms