RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 BIRC8Q96P09 236 aa14.27□□□□□ -0.13
TTC39A-216ENST00000530004 UNKQ9C0B0 810 aaKnown RBP14.27□□□□□ -0.13
TTC39A-216ENST00000530004 SGK2Q9HBY8 427 aa14.27□□□□□ -0.13
TTC39A-216ENST00000530004 IGSF5Q9NSI5 407 aa14.27□□□□□ -0.13
TTC39A-216ENST00000530004 PKD2L2Q9NZM6 624 aa14.27□□□□□ -0.13
TTC39A-216ENST00000530004 CRLS1Q9UJA2 301 aa14.27□□□□□ -0.13
TTC39A-216ENST00000530004 IGHV1OR15-9A0A0B4J2B8 117 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 TK2O00142 265 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 NEMP1O14524 444 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 KLF11O14901 512 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 WISP3O95389 354 aaPredicted RBP14.26□□□□□ -0.13
TTC39A-216ENST00000530004 CCDC166P0CW27 439 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 CPA3P15088 417 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 CD6P30203 668 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 OXTRP30559 389 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 PPARGP37231 505 aaPredicted RBP14.26□□□□□ -0.13
TTC39A-216ENST00000530004 PDAP1Q13442 181 aaKnown RBP14.26□□□□□ -0.13
TTC39A-216ENST00000530004 FAM83EQ2M2I3 478 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 GPR33Q49SQ1 333 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 TMEM52BQ4KMG9 183 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 FOXR1Q6PIV2 292 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 TMEM207Q6UWW9 146 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 PIGWQ7Z7B1 504 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 C10orf107Q8IVU9 208 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 FRMD1Q8N878 549 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 HEXDCQ8WVB3 486 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 ANKRD49Q8WVL7 239 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 SEC16BQ96JE7 1060 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 GPR78Q96P69 363 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 PLEKHG4BQ96PX9 1271 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 TTC1Q99614 292 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 KDM4CQ9H3R0 1056 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 POPDC3Q9HBV1 291 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 WSB2Q9NYS7 404 aaPredicted RBP14.26□□□□□ -0.13
TTC39A-216ENST00000530004 CPSF2Q9P2I0 782 aaKnown RBP14.26□□□□□ -0.13
TTC39A-216ENST00000530004 CD84Q9UIB8 345 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 MID2Q9UJV3 735 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 CACNA1IQ9P0X4 2223 aa14.26□□□□□ -0.13
TTC39A-216ENST00000530004 ZNF106Q9H2Y7 1883 aaKnown RBP14.26□□□□□ -0.13
TTC39A-216ENST00000530004 TRBV5-4A0A0C4DH59 114 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 TSPAN6O43657 245 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 LTA4HP09960 611 aaKnown RBP14.25□□□□□ -0.13
TTC39A-216ENST00000530004 ACRV1P26436 265 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 FNTBP49356 437 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 KPNA2P52292 529 aaKnown RBP14.25□□□□□ -0.13
TTC39A-216ENST00000530004 ADARP55265 1226 aaKnown RBP14.25□□□□□ -0.13
TTC39A-216ENST00000530004 USP39Q53GS9 565 aaKnown RBP14.25□□□□□ -0.13
TTC39A-216ENST00000530004 CTSL3PQ5NE16 218 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 AGAP9Q5VTM2 703 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 LYPLAL1Q5VWZ2 237 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 ATG16L1Q676U5 607 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 CGB2Q6NT52 195 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 ZCCHC23Q6ZST2 131 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 HSD11B1LQ7Z5J1 315 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 FSTL5Q8N475 847 aaPredicted RBP14.25□□□□□ -0.13
TTC39A-216ENST00000530004 FAM160A2Q8N612 972 aaPredicted RBP14.25□□□□□ -0.13
TTC39A-216ENST00000530004 PPP1R14CQ8TAE6 165 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 RAB3IL1Q8TBN0 382 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 TOE1Q96GM8 510 aaKnown RBP14.25□□□□□ -0.13
TTC39A-216ENST00000530004 UBXN10Q96LJ8 280 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 TSSK1BQ9BXA7 367 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 P2RY12Q9H244 342 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 PREBQ9HCU5 417 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 TAS2R13Q9NYV9 303 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 XPR1Q9UBH6 696 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 MED16Q9Y2X0 877 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 COMMD10Q9Y6G5 202 aa14.25□□□□□ -0.13
TTC39A-216ENST00000530004 TBC1D3DA0A087WVF3 549 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 TBC1D3IA0A087WXS9 549 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 TBC1D3EA0A087X179 549 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 TBC1D3KA0A087X1G2 549 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 TBC1D3FA6NER0 549 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 TBC1D3LB9A6J9 549 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 G3V2L1 256 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 H0Y858 1186 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 PRMT5O14744 637 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 SNX3O60493 162 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 NIPSNAP2O75323 286 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 PCDH8O95206 1070 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 ESR1P03372 595 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 TBC1D3HP0C7X1 549 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 MYL2P10916 166 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 FGF3P11487 239 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 ZNF7P17097 686 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 BST1Q10588 318 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 ATP13A5Q4VNC0 1218 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 TBC1D3GQ6DHY5 549 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 TBC1D3CQ6IPX1 549 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 NEK5Q6P3R8 708 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 KLC3Q6P597 504 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 LIPIQ6XZB0 460 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 OTOAQ7RTW8 1153 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 WDR5BQ86VZ2 330 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 LONP2Q86WA8 852 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 TBC1D3Q8IZP1 549 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 CACNA2D3Q8IZS8 1091 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 RBFAQ8N0V3 343 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 NXPE1Q8N323 547 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 TMEM151AQ8N4L1 468 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 OR2T34Q8NGX1 318 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms