RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 GAP43P17677 238 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 BDNFP23560 247 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 PBX1P40424 430 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 CYP4F2P78329 520 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 DMC1Q14565 340 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 KCNB1Q14721 858 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 CCDC6Q16204 474 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 ERCC6LQ2NKX8 1250 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 FAM153CQ494X1 144 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 PLK5Q496M5 336 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 SOWAHCQ53LP3 525 aaPredicted RBP5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 CRELD2Q6UXH1 353 aaPredicted RBP5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 ZNF720Q7Z2F6 126 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 SFR1Q86XK3 245 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 SPATA2LQ8IUW3 424 aaPredicted RBP5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 BRSK2Q8IWQ3 736 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 TMEM86AQ8N2M4 240 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 PDCL2Q8N4E4 241 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 FSIP1Q8NA03 581 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 ATG16L2Q8NAA4 619 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 RPLP0P6Q8NHW5 317 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 RP9Q8TA86 221 aaKnown RBP5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 SPATA18Q8TC71 538 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 LRRC15Q8TF66 581 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 CD101Q93033 1021 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 CTHRC1Q96CG8 243 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 ACCSQ96QU6 501 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 FAM213AQ9BRX8 229 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 PRDM13Q9H4Q3 707 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 ECT2Q9H8V3 914 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 MRPL44Q9H9J2 332 aaKnown RBP5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 TMLHEQ9NVH6 421 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 DDX43Q9NXZ2 648 aaKnown RBP5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 RBAKQ9NYW8 714 aaPredicted RBP5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 NKX1-2Q9UD57 310 aaPredicted RBP5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 ZNHIT2Q9UHR6 403 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 ITGA11Q9UKX5 1188 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 SPAG17Q6Q759 2223 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 SCN1AP35498 2009 aa5.31□□□□□ -1.56
AMBRA1-209ENST00000529963 LAMA1P25391 3075 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 LGALS16A8MUM7 142 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 GCNT3O95395 438 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 NFATC1O95644 943 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 CAVIN2O95810 425 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 HNRNPCP07910 306 aaKnown RBP eCLIP5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 KRT19P08727 400 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 NPSP0C0P6 89 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 TMEM191BP0C7N4 346 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 ACAT1P24752 427 aaKnown RBP5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 CYP2F1P24903 491 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 ADSSP30520 456 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 HOXC13P31276 330 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 MAPK9P45984 424 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 LHX1P48742 406 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 HMGA2P52926 109 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 CACNA2D1P54289 1103 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 RBP5P82980 135 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 CREB5Q02930 508 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 ALCAMQ13740 583 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 ZNF77Q15935 545 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 PFKFB4Q16877 469 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 CFAP221Q4G0U5 840 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 SDHAF4Q5VUM1 108 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 GRHL2Q6ISB3 625 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 ANKRD16Q6P6B7 361 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 LVRNQ6Q4G3 990 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 C4orf50Q6ZRC1 276 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 SYT13Q7L8C5 426 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 SCN4BQ8IWT1 228 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 ADGRF2Q8IZF7 708 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 SYCP3Q8IZU3 236 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 CSGALNACT2Q8N6G5 542 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 SIRT6Q8N6T7 355 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 STKLD1Q8NE28 680 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 TSTD1Q8NFU3 115 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 ABHD11Q8NFV4 315 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 MBD3L2Q8NHZ7 208 aaPredicted RBP5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 SUN3Q8TAQ9 357 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 ABHD5Q8WTS1 349 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 SAAL1Q96ER3 474 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 ZDHHC12Q96GR4 267 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 PRR11Q96HE9 360 aaPredicted RBP5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 ANKRD36BP1Q96IX9 119 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 MPP4Q96JB8 637 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 EDEM2Q9BV94 578 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 FSD1LQ9BXM9 530 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 UPF2Q9HAU5 1272 aaKnown RBP5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 FBRSL1Q9HCM7 1045 aaKnown RBP5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 RXFP3Q9NSD7 469 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 GDAP2Q9NXN4 497 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 STEAP1Q9UHE8 339 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 GTF3C4Q9UKN8 822 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 AMFRQ9UKV5 643 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 GPR52Q9Y2T5 361 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 ENTPD2Q9Y5L3 495 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 SNX9Q9Y5X1 595 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 WNT6Q9Y6F9 365 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 GREB1Q4ZG55 1949 aa5.3□□□□□ -1.56
AMBRA1-209ENST00000529963 KIF26AQ9ULI4 1882 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms