RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ADGRE3Q9BY15 652 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 ULBP3Q9BZM4 244 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 SUFUQ9UMX1 484 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 MAP4K5Q9Y4K4 846 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 HEY1Q9Y5J3 304 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 MRPS18BQ9Y676 258 aaKnown RBP10.41□□□□□ -0.74
CPSF1-203ENST00000527916 OAS3Q9Y6K5 1087 aaKnown RBP10.41□□□□□ -0.74
CPSF1-203ENST00000527916 F8P00451 2351 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 APCP25054 2843 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 CELSR1Q9NYQ6 3014 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 CDC14CA4D256 554 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 KCNK1O00180 336 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 PPP1R12AO14974 1030 aaPredicted RBP10.4□□□□□ -0.74
CPSF1-203ENST00000527916 KATNA1O75449 491 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 CLDN7O95471 211 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 RECKO95980 971 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 RNF224P0DH78 156 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 COMTP21964 271 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 ADCY8P40145 1251 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 ACTR1BP42025 376 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 SPINT3P49223 89 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 PGDP52209 483 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 ACTR1AP61163 376 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 QPCTQ16769 361 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 ODF2Q5BJF6 829 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 C6orf15Q6UXA7 325 aaPredicted RBP10.4□□□□□ -0.74
CPSF1-203ENST00000527916 RFLNAQ6ZTI6 216 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 LYSMD3Q7Z3D4 306 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 APLFQ8IW19 511 aaPredicted RBP10.4□□□□□ -0.74
CPSF1-203ENST00000527916 SRRM1Q8IYB3 904 aaKnown RBP10.4□□□□□ -0.74
CPSF1-203ENST00000527916 TC2NQ8N9U0 490 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 CCHCR1Q8TD31 782 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 NCSTNQ92542 709 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 SCAMP4Q969E2 229 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 TADA1Q96BN2 335 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 MOCOSQ96EN8 888 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 IMP4Q96G21 291 aaKnown RBP10.4□□□□□ -0.74
CPSF1-203ENST00000527916 WDR24Q96S15 920 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 SRPK1Q96SB4 655 aaKnown RBP10.4□□□□□ -0.74
CPSF1-203ENST00000527916 TWSG1Q9GZX9 223 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 STN1Q9H668 368 aaKnown RBP10.4□□□□□ -0.74
CPSF1-203ENST00000527916 APMAPQ9HDC9 416 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 VPS18Q9P253 973 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 CROTQ9UKG9 612 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 TTLL3Q9Y4R7 772 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 ALG6Q9Y672 507 aa10.4□□□□□ -0.74
CPSF1-203ENST00000527916 ZFHX3Q15911 3703 aa10.4□□□□□ -0.75
CPSF1-203ENST00000527916 ADGRG4Q8IZF6 3080 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 A0A0A6YYK5 440 aaPredicted RBP10.39□□□□□ -0.75
CPSF1-203ENST00000527916 A0A0U1RQS6 177 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 PIPSLA2A3N6 862 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 GOLGA6CA6NDK9 693 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 GOLGA6BA6NDN3 693 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 PSTPIP1O43586 416 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 KRT38O76015 456 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 KRT1P04264 644 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 CCNYL3P0C7X3 344 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 GOLGA6DP0CG33 693 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 F8A1P23610 371 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 CD86P42081 329 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 CDKN2BP42772 138 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 MAGEA1P43355 309 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 AP1B1Q10567 949 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 ZBTB17Q13105 803 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 LRP8Q14114 963 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 TFDP2Q14188 446 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 EIF2S3LQ2VIR3 472 aaKnown RBP10.39□□□□□ -0.75
CPSF1-203ENST00000527916 PYCR3Q53H96 274 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 TEX44Q53QW1 395 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 HENMT1Q5T8I9 393 aaKnown RBP10.39□□□□□ -0.75
CPSF1-203ENST00000527916 NT5DC3Q86UY8 548 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 RFX6Q8HWS3 928 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 LPCAT1Q8NF37 534 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 PRR7Q8TB68 274 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 LRRN4Q8WUT4 740 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 SEC14L1Q92503 715 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 SH3KBP1Q96B97 665 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 RNF25Q96BH1 459 aaPredicted RBP10.39□□□□□ -0.75
CPSF1-203ENST00000527916 STAMBPL1Q96FJ0 436 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 CALR3Q96L12 384 aaKnown RBP10.39□□□□□ -0.75
CPSF1-203ENST00000527916 SMIM14Q96QK8 99 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 TRIB3Q96RU7 358 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 RIOK2Q9BVS4 552 aaKnown RBP10.39□□□□□ -0.75
CPSF1-203ENST00000527916 TRIM5Q9C035 493 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 SLC25A51Q9H1U9 297 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 FAM83DQ9H4H8 585 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 RMI1Q9H9A7 625 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 MAGEE1Q9HCI5 957 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 GOLGA6AQ9NYA3 693 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 PKD2L2Q9NZM6 624 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 CD84Q9UIB8 345 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 CNOT6Q9ULM6 557 aaKnown RBP10.39□□□□□ -0.75
CPSF1-203ENST00000527916 ST14Q9Y5Y6 855 aa10.39□□□□□ -0.75
CPSF1-203ENST00000527916 DIDO1Q9BTC0 2240 aaKnown RBP10.38□□□□□ -0.75
CPSF1-203ENST00000527916 TNRC6AQ8NDV7 1962 aaKnown RBP10.38□□□□□ -0.75
CPSF1-203ENST00000527916 C1orf232A0A0U1RR37 186 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 SPOPO43791 374 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 DNAJC6O75061 913 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 CREG1O75629 220 aa10.38□□□□□ -0.75
CPSF1-203ENST00000527916 ZRANB2O95218 330 aaKnown RBP eCLIP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms