RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 SERPINC1P01008 464 aa23.19■■□□□ 1.3
CPSF1-202ENST00000527827 PBX1P40424 430 aa23.19■■□□□ 1.3
CPSF1-202ENST00000527827 IFI35P80217 286 aaPredicted RBP23.19■■□□□ 1.3
CPSF1-202ENST00000527827 PPIDQ08752 370 aaKnown RBP23.19■■□□□ 1.3
CPSF1-202ENST00000527827 NFKBIBQ15653 356 aa23.19■■□□□ 1.3
CPSF1-202ENST00000527827 SEPT7Q16181 437 aaKnown RBP23.19■■□□□ 1.3
CPSF1-202ENST00000527827 TCTN3Q6NUS6 607 aa23.19■■□□□ 1.3
CPSF1-202ENST00000527827 ABRAXAS1Q6UWZ7 409 aa23.19■■□□□ 1.3
CPSF1-202ENST00000527827 PRSS42Q7Z5A4 293 aa23.19■■□□□ 1.3
CPSF1-202ENST00000527827 LRRTM4Q86VH4 590 aa23.19■■□□□ 1.3
CPSF1-202ENST00000527827 ZNF547Q8IVP9 402 aa23.19■■□□□ 1.3
CPSF1-202ENST00000527827 ELMO2Q96JJ3 720 aa23.19■■□□□ 1.3
CPSF1-202ENST00000527827 TIMM29Q9BSF4 260 aa23.19■■□□□ 1.3
CPSF1-202ENST00000527827 PDZK1P1A8MUH7 402 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 GOLGA6L22H0YM25 854 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 MTSS1O43312 755 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 MTX2O75431 263 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 FGF5P12034 268 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 CAPZBP47756 277 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 CD97P48960 835 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 IQCB1Q15051 598 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 KHDC1Q4VXA5 237 aaKnown RBP23.18■■□□□ 1.3
CPSF1-202ENST00000527827 PDPK2PQ6A1A2 396 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 TMEM135Q86UB9 458 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 RASGRP3Q8IV61 690 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 FAM26EQ8N5C1 309 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 KLHL6Q8WZ60 621 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 STAMBPL1Q96FJ0 436 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 RNF157Q96PX1 679 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 MAGEE1Q9HCI5 957 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 SLC40A1Q9NP59 571 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 POT1Q9NUX5 634 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 POLHQ9Y253 713 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 ZNF711Q9Y462 761 aa23.18■■□□□ 1.3
CPSF1-202ENST00000527827 SPTAN1Q13813 2472 aaKnown RBP23.17■■□□□ 1.3
CPSF1-202ENST00000527827 MKRN2OSH3BPM6 223 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 KATNA1O75449 491 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 RASSF9O75901 435 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 SLC4A1P02730 911 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 NTRK1P04629 796 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 KRT7P08729 469 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 RPL10P27635 214 aaKnown RBP23.17■■□□□ 1.3
CPSF1-202ENST00000527827 GPR18Q14330 331 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 CACHD1Q5VU97 1274 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 PLD5Q8N7P1 536 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 RAPGEF5Q92565 580 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 IMP4Q96G21 291 aaKnown RBP23.17■■□□□ 1.3
CPSF1-202ENST00000527827 CEP41Q9BYV8 373 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 RAD18Q9NS91 495 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 CTTNBP2NLQ9P2B4 639 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 KCND3Q9UK17 655 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 TMPRSS11EQ9UL52 423 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 PCDHGA6Q9Y5G7 932 aa23.17■■□□□ 1.3
CPSF1-202ENST00000527827 UTP20O75691 2785 aaKnown RBP23.16■■□□□ 1.3
CPSF1-202ENST00000527827 OR52A4PA6NMU1 304 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 VEGFDO43915 354 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 SPAG6O75602 509 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 BPIP17213 487 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 KDELR1P24390 212 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 ZBED6P86452 979 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 AGAP9Q5VTM2 703 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 WASH2PQ6VEQ5 465 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 C11orf96Q7Z7L8 435 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 CPLX3Q8WVH0 158 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 TADA1Q96BN2 335 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 ZNF830Q96NB3 372 aaPredicted RBP23.16■■□□□ 1.3
CPSF1-202ENST00000527827 PSMG3-AS1Q96PY0 264 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 GPR63Q9BZJ6 419 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 WASH6PQ9NQA3 447 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 EPHA6Q9UF33 1036 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 LNPEPQ9UIQ6 1025 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 CAPN11Q9UMQ6 739 aa23.16■■□□□ 1.3
CPSF1-202ENST00000527827 CDC14CA4D256 554 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 CREG1O75629 220 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 RFPL1O75677 317 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 CDK14O94921 469 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 TIAF1O95411 115 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 NELFEP18615 380 aaKnown RBP23.15■■□□□ 1.3
CPSF1-202ENST00000527827 DRG2P55039 364 aaKnown RBP23.15■■□□□ 1.3
CPSF1-202ENST00000527827 MLLT10P55197 1068 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 PCSK7Q16549 785 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.15■■□□□ 1.3
CPSF1-202ENST00000527827 FAM92BQ6ZTR7 304 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 ASB18Q6ZVZ8 466 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 TEX19Q8NA77 164 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 UVRAGQ9P2Y5 699 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 TLK1Q9UKI8 766 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 PADI1Q9ULC6 663 aa23.15■■□□□ 1.3
CPSF1-202ENST00000527827 TNRC6AQ8NDV7 1962 aaKnown RBP23.14■■□□□ 1.3
CPSF1-202ENST00000527827 RECKO95980 971 aa23.14■■□□□ 1.29
CPSF1-202ENST00000527827 IDSP22304 550 aa23.14■■□□□ 1.29
CPSF1-202ENST00000527827 PMS2P54278 862 aa23.14■■□□□ 1.29
CPSF1-202ENST00000527827 PPP1CAP62136 330 aa23.14■■□□□ 1.29
CPSF1-202ENST00000527827 CDK18Q07002 472 aa23.14■■□□□ 1.29
CPSF1-202ENST00000527827 DNASE1L3Q13609 305 aa23.14■■□□□ 1.29
CPSF1-202ENST00000527827 IRGCQ6NXR0 463 aa23.14■■□□□ 1.29
CPSF1-202ENST00000527827 NT5DC3Q86UY8 548 aa23.14■■□□□ 1.29
CPSF1-202ENST00000527827 PPP1R3BQ86XI6 285 aa23.14■■□□□ 1.29
CPSF1-202ENST00000527827 RBM12BQ8IXT5 1001 aaKnown RBP23.14■■□□□ 1.29
CPSF1-202ENST00000527827 CT55Q8WUE5 264 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms