RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ZNF7P17097 686 aaPredicted RBP15.19■□□□□ 0.02
USH1C-207ENST00000527720 PCBP2Q15366 365 aaKnown RBP eCLIP15.19■□□□□ 0.02
USH1C-207ENST00000527720 VPS26BQ4G0F5 336 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 FOXB2Q5VYV0 432 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 FAM219BQ5XKK7 198 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 LYSMD3Q7Z3D4 306 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 ARPINQ7Z6K5 226 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 DDX53Q86TM3 631 aaKnown RBP15.19■□□□□ 0.02
USH1C-207ENST00000527720 ZNF296Q8WUU4 475 aaPredicted RBP15.19■□□□□ 0.02
USH1C-207ENST00000527720 ZNF689Q96CS4 500 aaPredicted RBP15.19■□□□□ 0.02
USH1C-207ENST00000527720 TOX2Q96NM4 488 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 TRIM54Q9BYV2 358 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 GIMAP2Q9UG22 337 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 ZNF225Q9UK10 706 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 ZNF510Q9Y2H8 683 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 AP4B1Q9Y6B7 739 aa15.19■□□□□ 0.02
USH1C-207ENST00000527720 PIKFYVEQ9Y2I7 2098 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 A0A1W2PP18 115 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 AQP12BA6NM10 295 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 HTRA2O43464 458 aaPredicted RBP15.18■□□□□ 0.02
USH1C-207ENST00000527720 ERVK-8P63133 956 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 RCAN2Q14206 197 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 PDCD4Q53EL6 469 aaKnown RBP15.18■□□□□ 0.02
USH1C-207ENST00000527720 ATXN7L2Q5T6C5 722 aaPredicted RBP15.18■□□□□ 0.02
USH1C-207ENST00000527720 LYPLAL1Q5VWZ2 237 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 AQP12AQ8IXF9 295 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 GPR65Q8IYL9 337 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 OR2T34Q8NGX1 318 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 OR2T3Q8NH03 318 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 LRRC58Q96CX6 371 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 EID2BQ96D98 161 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 SLC22A12Q96S37 553 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 MUC13Q9H3R2 512 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 ARMC1Q9NVT9 282 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 APPL1Q9UKG1 709 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 TIMM22Q9Y584 194 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 CXorf51AA0A1B0GTR3 108 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 FXYD1O00168 92 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 NME4O00746 187 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 SOCS5O75159 536 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 FESP07332 822 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 LAG3P18627 525 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 KCNK10P57789 538 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 LIN52Q52LA3 116 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 MPP7Q5T2T1 576 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 SNX20Q7Z614 316 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 CPXM2Q8N436 756 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 ARL14EPQ8N8R7 260 aaPredicted RBP15.18■□□□□ 0.02
USH1C-207ENST00000527720 EME1Q96AY2 570 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 SLCO4A1Q96BD0 722 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 SLC39A3Q9BRY0 314 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 CLPBQ9H078 707 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 IL21Q9HBE4 155 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 ZFYVE1Q9HBF4 777 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 ZNF334Q9HCZ1 680 aaPredicted RBP15.18■□□□□ 0.02
USH1C-207ENST00000527720 ZIM2Q9NZV7 527 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 GNPTGQ9UJJ9 305 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 FNDC3AQ9Y2H6 1198 aaKnown RBP15.18■□□□□ 0.02
USH1C-207ENST00000527720 CPQQ9Y646 472 aa15.18■□□□□ 0.02
USH1C-207ENST00000527720 AHCYL1O43865 530 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 TRBC1P01850 177 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 ZNF26P17031 533 aaPredicted RBP15.17■□□□□ 0.02
USH1C-207ENST00000527720 PRDX3P30048 256 aaKnown RBP15.17■□□□□ 0.02
USH1C-207ENST00000527720 NME5P56597 212 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 ECT2LQ008S8 904 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 BCL2L1Q07817 233 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 PTPRRQ15256 657 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 SLC39A5Q6ZMH5 540 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 FRA10AC1Q70Z53 315 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 HOMEZQ8IX15 550 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 SLC15A3Q8IY34 581 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 RBFAQ8N0V3 343 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 AHI1Q8N157 1196 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 WFDC5Q8TCV5 224 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 DEFB118Q96PH6 123 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 SARS2Q9NP81 518 aaKnown RBP15.17■□□□□ 0.02
USH1C-207ENST00000527720 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.17■□□□□ 0.02
USH1C-207ENST00000527720 MRPL17Q9NRX2 175 aaKnown RBP15.17■□□□□ 0.02
USH1C-207ENST00000527720 SPG21Q9NZD8 308 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 EIF2B4Q9UI10 523 aaKnown RBP15.17■□□□□ 0.02
USH1C-207ENST00000527720 HELZP42694 1942 aaKnown RBP15.17■□□□□ 0.02
USH1C-207ENST00000527720 DYTNA2CJ06 578 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 GRXCR2A6NFK2 248 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 EEDO75530 441 aaKnown RBP15.17■□□□□ 0.02
USH1C-207ENST00000527720 PRAMEF1O95521 474 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 PRAMEF12O95522 483 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 NPPAP01160 153 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 S100BP04271 92 aaPredicted RBP15.17■□□□□ 0.02
USH1C-207ENST00000527720 CTPS1P17812 591 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 RGS4P49798 205 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 DIO3P55073 304 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 FBXO48Q5FWF7 155 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 PTRHD1Q6GMV3 140 aaKnown RBP15.17■□□□□ 0.02
USH1C-207ENST00000527720 SERPINA9Q86WD7 417 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 PDPRQ8NCN5 879 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 PLEKHG4BQ96PX9 1271 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 PLK2Q9NYY3 685 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 ST14Q9Y5Y6 855 aa15.17■□□□□ 0.02
USH1C-207ENST00000527720 TRBV5-4A0A0C4DH59 114 aa15.16■□□□□ 0.02
USH1C-207ENST00000527720 RAD51BO15315 384 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms