RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 UMPSP11172 480 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 NR4A1P22736 598 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 SLC26A3P40879 764 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 BCAP31P51572 246 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 RAB15P59190 212 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 TRIM71Q2Q1W2 868 aaKnown RBP12.4□□□□□ -0.42
CAPN1-208ENST00000527323 PDCD4Q53EL6 469 aaKnown RBP12.4□□□□□ -0.42
CAPN1-208ENST00000527323 TIGD5Q53EQ6 642 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 LDLRAP1Q5SW96 308 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 BROXQ5VW32 411 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 KANK2Q63ZY3 851 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 TMEM173Q86WV6 379 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-208ENST00000527323 FBXO39Q8N4B4 442 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 NSMCE2Q96MF7 247 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 SP110Q9HB58 689 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 TMEM9Q9P0T7 183 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 UXTQ9UBK9 157 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-208ENST00000527323 OAS3Q9Y6K5 1087 aaKnown RBP12.4□□□□□ -0.42
CAPN1-208ENST00000527323 A0A1B0GTL3 188 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 SLC22A3O75751 556 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 RSL1D1O76021 490 aaKnown RBP12.4□□□□□ -0.42
CAPN1-208ENST00000527323 PIRTP0C851 137 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 SYN1P17600 705 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 FOXM1Q08050 763 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 RGS21Q2M5E4 152 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 BRMS1LQ5PSV4 323 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 ANKS6Q68DC2 871 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 GLYATQ6IB77 296 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 ZNF773Q6PK81 442 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 LRRC8DQ7L1W4 858 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 PHYKPLQ8IUZ5 450 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 TANKQ92844 425 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 CASP10Q92851 521 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 TRNAU1APQ9NX07 287 aaKnown RBP12.4□□□□□ -0.42
CAPN1-208ENST00000527323 LEF1Q9UJU2 399 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-208ENST00000527323 NEU3Q9UQ49 428 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 FAM50BQ9Y247 325 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.43
CAPN1-208ENST00000527323 CD3EAPO15446 510 aaKnown RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 SYNCRIPO60506 623 aaKnown RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 SNX2O60749 519 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 CHEK2O96017 543 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 FAM163BP0C2L3 166 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 MRNIPQ6NTE8 343 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 ZNF549Q6P9A3 640 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 OTOP2Q7RTS6 562 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 NAT16Q8N8M0 369 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 RTL3Q8N8U3 475 aaKnown RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 IMP4Q96G21 291 aaKnown RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 MUC13Q9H3R2 512 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 NANOGQ9H9S0 305 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 ARNT2Q9HBZ2 717 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 INTS7Q9NVH2 962 aaKnown RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 POLR3BQ9NW08 1133 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 ARIH1Q9Y4X5 557 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 CORINQ9Y5Q5 1042 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 MAGED1Q9Y5V3 778 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 GPR45Q9Y5Y3 372 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 ZNF236Q9UL36 1845 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 COL6A3P12111 3177 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 TCRBV5S2A0A599 114 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 VPS4BO75351 444 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 GMNNO75496 209 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 RHOBTB1O94844 696 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 GOT2P00505 430 aaKnown RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 CDH3P22223 829 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 NFKBIAP25963 317 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 POLR2JP52435 117 aaKnown RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 ADARB1P78563 741 aaKnown RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 NFKB2Q00653 900 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 LCP2Q13094 533 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 RBBP7Q16576 425 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 IMPG1Q17R60 797 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 SIRPB2Q5JXA9 342 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 CLLU1OSQ5K130 101 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 TMCO5AQ8N6Q1 288 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 OR13F1Q8NGS4 319 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 PNPT1Q8TCS8 783 aaKnown RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 RSPH1Q8WYR4 309 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 SNX19Q92543 992 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 TUBA1CQ9BQE3 449 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 PAPSS2O95340 614 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 MBL2P11226 248 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-208ENST00000527323 MTHFD2P13995 350 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 CA8P35219 290 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 TMBIM6P55061 237 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 OR4D2P58180 307 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 TRIM16LQ309B1 348 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 TRAF7Q6Q0C0 670 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 SPATA19Q7Z5L4 167 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 METTL23Q86XA0 190 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 FAM126BQ8IXS8 530 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 KIAA2013Q8IYS2 634 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 DCBLD1Q8N8Z6 715 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 ESAMQ96AP7 390 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 HMCESQ96FZ2 354 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 ACOX2Q99424 681 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 DGCR6LQ9BY27 220 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 ABCC13Q9NSE7 274 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 SEPT3Q9UH03 358 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms