RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 IL1RAPL1Q9NZN1 696 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 CHMP2BQ9UQN3 213 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 CSNK1G3Q9Y6M4 447 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 CACNA1AO00555 2505 aa16.44■□□□□ 0.22
SMCO4-204ENST00000527149 LMO7DNF2Z398 122 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 SLC30A4O14863 429 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 AQP9O43315 295 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 TNFP01375 233 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 CAV1Q03135 178 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 PDIA2Q13087 525 aaKnown RBP16.43■□□□□ 0.22
SMCO4-204ENST00000527149 C1orf61Q13536 156 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 UAP1L1Q3KQV9 507 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 UNC5AQ6ZN44 842 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 RD3Q7Z3Z2 195 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 PIP4P1Q86T03 277 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 GALNT13Q8IUC8 556 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 UNC5BQ8IZJ1 945 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 CCL4L1Q8NHW4 92 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 GDAP1Q8TB36 358 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 BAHD1Q8TBE0 780 aaPredicted RBP16.43■□□□□ 0.22
SMCO4-204ENST00000527149 GPBAR1Q8TDU6 330 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 LMX1AQ8TE12 382 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 NAT14Q8WUY8 206 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 COPS8Q99627 209 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 NAT9Q9BTE0 207 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 ZCCHC2Q9C0B9 1178 aaKnown RBP16.43■□□□□ 0.22
SMCO4-204ENST00000527149 SPASTQ9UBP0 616 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 PRKAB1Q9Y478 270 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 PLEKHM1Q9Y4G2 1056 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 ASXL3Q9C0F0 2248 aa16.43■□□□□ 0.22
SMCO4-204ENST00000527149 EIF3HO15372 352 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMCO4-204ENST00000527149 FLRT2O43155 660 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 CBFA2T3O75081 653 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 CDK14O94921 469 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 TTC4O95801 387 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 ITIH4Q14624 930 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 TCEA2Q15560 299 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 SMAD1Q15797 465 aaKnown RBP16.42■□□□□ 0.22
SMCO4-204ENST00000527149 TYSND1Q2T9J0 566 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 BCL7AQ4VC05 210 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 HP1BP3Q5SSJ5 553 aaPredicted RBP16.42■□□□□ 0.22
SMCO4-204ENST00000527149 XKR5Q6UX68 686 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 PACS1Q6VY07 963 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 FSTL5Q8N475 847 aaPredicted RBP16.42■□□□□ 0.22
SMCO4-204ENST00000527149 GPR150Q8NGU9 434 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 FAM114A2Q9NRY5 505 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 CATSPERZQ9NTU4 200 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 GULP1Q9UBP9 304 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 MOSPD1Q9UJG1 213 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 FAM169AQ9Y6X4 670 aa16.42■□□□□ 0.22
SMCO4-204ENST00000527149 GOLGA8KD6RF30 607 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 GOLGA8TH3BQL2 631 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 TRIM38O00635 465 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 CD3EAPO15446 510 aaKnown RBP16.41■□□□□ 0.22
SMCO4-204ENST00000527149 GRID2O43424 1007 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 POLBP06746 335 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 PAMP19021 973 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 AKT1P31749 480 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 PRLHRP49683 370 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 CTBSQ01459 385 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 LRP8Q14114 963 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 FRG1Q14331 258 aaKnown RBP16.41■□□□□ 0.22
SMCO4-204ENST00000527149 ELOCQ15369 112 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 FASTKD1Q53R41 847 aaKnown RBP16.41■□□□□ 0.22
SMCO4-204ENST00000527149 SPANXN3Q5MJ09 141 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 CRTC3Q6UUV7 619 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 CENPUQ71F23 418 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 TAS2R42Q7RTR8 314 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 LDB1Q86U70 411 aaPredicted RBP16.41■□□□□ 0.22
SMCO4-204ENST00000527149 CCNJLQ8IV13 435 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 ANKMY2Q8IV38 441 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 NAXDQ8IW45 347 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMCO4-204ENST00000527149 FBXO36Q8NEA4 188 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 OR4C6Q8NH72 309 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 FAM129AQ9BZQ8 928 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 SLC23A2Q9UGH3 650 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 ZC3H7BQ9UGR2 993 aaKnown RBP16.41■□□□□ 0.22
SMCO4-204ENST00000527149 PRSS21Q9Y6M0 314 aa16.41■□□□□ 0.22
SMCO4-204ENST00000527149 LY6G6EA0A0G2JKS1 128 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 YY2O15391 372 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 FFAR2O15552 330 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 SH3BP5O60239 455 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 OR1I1O60431 355 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 RHOXF2BP0C7M4 288 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 ACP5P13686 325 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 MSH3P20585 1137 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 OGNP20774 298 aaKnown RBP16.4■□□□□ 0.22
SMCO4-204ENST00000527149 AK4P27144 223 aaPredicted RBP16.4■□□□□ 0.22
SMCO4-204ENST00000527149 GRK6P43250 576 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 CARSP49589 748 aaKnown RBP16.4■□□□□ 0.22
SMCO4-204ENST00000527149 LONRF1Q17RB8 773 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 DEFB133Q30KQ1 61 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 ZNF658BQ4V348 819 aaPredicted RBP16.4■□□□□ 0.22
SMCO4-204ENST00000527149 AARS2Q5JTZ9 985 aaKnown RBP16.4■□□□□ 0.22
SMCO4-204ENST00000527149 NEPROQ6NW34 567 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 TRMT10BQ6PF06 316 aaKnown RBP16.4■□□□□ 0.22
SMCO4-204ENST00000527149 CERS6Q6ZMG9 384 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 DET1Q7L5Y6 550 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 LRRTM4Q86VH4 590 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms