RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 RPL10P27635 214 aaKnown RBP12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 SERPINB6P35237 376 aa12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 LAMB3Q13751 1172 aa12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 NR6A1Q15406 480 aa12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 ZNF569Q5MCW4 686 aa12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 CDKAL1Q5VV42 579 aa12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 SLC6A19Q695T7 634 aa12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 RAVER1Q8IY67 606 aaKnown RBP12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 LYSMD1Q96S90 227 aa12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 PCDH9Q9HC56 1237 aa12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 POT1Q9NUX5 634 aa12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 FARSAQ9Y285 508 aaKnown RBP12.78□□□□□ -0.36
CLNS1A-207ENST00000527133 A6NL46 340 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 CEACAM4O75871 244 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 SLC25A14O95258 325 aaPredicted RBP12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 EBLN1P0CF75 366 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 BRAFP15056 766 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 FERP16591 822 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 ZNF7P17097 686 aaPredicted RBP12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 CA4P22748 312 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 VARSP26640 1264 aaKnown RBP12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 DRG2P55039 364 aaKnown RBP12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 PDE1BQ01064 536 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 ANKRD20A8PQ5CZ79 823 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 C1QL3Q5VWW1 255 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 ALS2CLQ60I27 953 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 PPP1R2P3Q6NXS1 205 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 ADGRG6Q86SQ4 1221 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 RBMXL3Q8N7X1 1067 aaKnown RBP12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 FDCSPQ8NFU4 85 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 CCHCR1Q8TD31 782 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 MR1Q95460 341 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 PNPLA2Q96AD5 504 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 ZNF653Q96CK0 615 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 CXorf40BQ96DE9 158 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 C19orf60Q96EN9 201 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 SLC41A2Q96JW4 573 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 C5orf34Q96MH7 638 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 FCRL4Q96PJ5 515 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 PHF12Q96QT6 1004 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 NUDT9Q9BW91 350 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 SPATA16Q9BXB7 569 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 TRIM39Q9HCM9 518 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 SLC40A1Q9NP59 571 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 DTLQ9NZJ0 730 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 TRIM10Q9UDY6 481 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 EPHA6Q9UF33 1036 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 G3BP2Q9UN86 482 aaKnown RBP12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 PCDHGB7Q9Y5F8 929 aa12.77□□□□□ -0.37
CLNS1A-207ENST00000527133 RGSL1A5PLK6 1076 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 KMOO15229 486 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 ZNF185O15231 689 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 CPNE3O75131 537 aaKnown RBP12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 CCDC172P0C7W6 258 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 LPOP22079 712 aaPredicted RBP12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 IL4RP24394 825 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 ELAVL4P26378 380 aaKnown RBP12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 PCK1P35558 622 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 ARL4DP49703 201 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 ZNF165P49910 485 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 RPL26P61254 145 aaKnown RBP12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 ACY1Q03154 408 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 NIPAL4Q0D2K0 466 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 QPCTQ16769 361 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 BOLA3Q53S33 107 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 CT47A1Q5JQC4 288 aaPredicted RBP12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 TXNRD3NBQ6F5E7 133 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 ALG1LQ6GMV1 187 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 ABRAXAS1Q6UWZ7 409 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 CERS6Q6ZMG9 384 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 LRRTM4Q86VH4 590 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 RHOT1Q8IXI2 618 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 RBM12BQ8IXT5 1001 aaKnown RBP12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 ENOX1Q8TC92 643 aaKnown RBP12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 UBXN4Q92575 508 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 ZNF514Q96K75 400 aaPredicted RBP12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 TIMM29Q9BSF4 260 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 SYT11Q9BT88 431 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 MLPHQ9BV36 600 aaPredicted RBP12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 RAB33BQ9H082 229 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 PCDH18Q9HCL0 1135 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 WASH6PQ9NQA3 447 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 FGF21Q9NSA1 209 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 RBM22Q9NW64 420 aaKnown RBP eCLIP12.76□□□□□ -0.371e-6■■■□□ 15.6
CLNS1A-207ENST00000527133 RPL26L1Q9UNX3 145 aaKnown RBP12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 SLC5A6Q9Y289 635 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 POLQO75417 2590 aa12.76□□□□□ -0.37
CLNS1A-207ENST00000527133 APCP25054 2843 aa12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 LGALS16A8MUM7 142 aa12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 GPR89AB7ZAQ6 455 aa12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 CHUKO15111 745 aa12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 MFSD11O43934 449 aa12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 MTX2O75431 263 aa12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 SCRG1O75711 98 aa12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 TMEM63AO94886 807 aa12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 SLC4A1P02730 911 aa12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 FTLP02792 175 aaPredicted RBP12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 GPR89BP0CG08 455 aa12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 RARAP10276 462 aa12.75□□□□□ -0.37
CLNS1A-207ENST00000527133 POU3F2P20265 443 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms