RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 A0A1W2PP11 408 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 LOC105371045A0A1W2PR82 267 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 BUD23O43709 281 aaKnown RBP2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 RAF1P04049 648 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 LIPFP07098 398 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 TRIM49P0CI25 452 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 TRIM49CP0CI26 452 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 CAPN2P17655 700 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 NFKBIAP25963 317 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 PGM1P36871 562 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 WNT5AP41221 380 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 UBA7P41226 1012 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 GABRB2P47870 512 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 COX10Q12887 443 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 GRAPQ13588 217 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 RAPSNQ13702 412 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 COL28A1Q2UY09 1125 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 FASTKD1Q53R41 847 aaKnown RBP2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 SLC25A30Q5SVS4 291 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 ZDHHC20Q5W0Z9 365 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 PAQR6Q6TCH4 344 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 Q6ZSR9 355 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 RRM2BQ7LG56 351 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 ZNF584Q8IVC4 421 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 PAF1Q8N7H5 531 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 OR2L2Q8NH16 312 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 GIMAP5Q96F15 307 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 MAGED4Q96JG8 741 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 KLHL15Q96M94 604 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 ACOX2Q99424 681 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 INTS2Q9H0H0 1204 aaKnown RBP2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 TDRD15B5MCY1 1934 aaKnown RBP2.34□□□□□ -2.04
ECHDC1-219ENST00000526299 IGHV4-4A0A075B6R2 117 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 USP17L23D6RBM5 183 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 M0QZ24 198 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 SNAP23O00161 211 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 TAF4O00268 1085 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 PPM1GO15355 546 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 GUCY1B2O75343 617 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 TCEA3O75764 348 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 FRMD6-AS1P0C7T7 363 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 CEACAM8P31997 349 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 NKX2-1P43699 371 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 UFM1P61960 85 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 MS4A2Q01362 244 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 DRAP1Q14919 205 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 RRS1Q15050 365 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 HSP90AB2PQ58FF8 381 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 C6orf141Q5SZD1 244 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 ADIPOR2Q86V24 386 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 IGSF8Q969P0 613 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 SMC6Q96SB8 1091 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 SLX1AQ9BQ83 275 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 TMEM47Q9BQJ4 181 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 DLGAP2Q9P1A6 1054 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 HCN3Q9P1Z3 774 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 LRWD1Q9UFC0 647 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 AAR2Q9Y312 384 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 RABGAP1Q9Y3P9 1069 aa2.33□□□□□ -2.04
ECHDC1-219ENST00000526299 WISP2O76076 250 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 AP2A2O94973 939 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 COX7A2P14406 83 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 PTGER3P43115 390 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 TBX4P57082 545 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 CTU2Q2VPK5 515 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 GLIPR1L2Q4G1C9 344 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 NDUFAF5Q5TEU4 345 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 PAPD4Q6PIY7 484 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 Q75L30 129 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 DPPA4Q7L190 304 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 TMEM178AQ8NBL3 297 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 ZPLD1Q8TCW7 415 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 PPP1R13BQ96KQ4 1090 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 HARBI1Q96MB7 349 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 SEMA3CQ99985 751 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 GPATCH1Q9BRR8 931 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 SLC28A3Q9HAS3 691 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 OR14J1Q9UGF5 321 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 MAN1B1Q9UKM7 699 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 HSF4Q9ULV5 492 aa2.32□□□□□ -2.04
ECHDC1-219ENST00000526299 hCG_1642624A0A1W2PR95 340 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 GAGE10A6NGK3 116 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 KLLNB2CW77 178 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 PLK4O00444 970 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 PLIN1O60240 522 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 SEC31AO94979 1220 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 KCNK5O95279 499 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 BMP10O95393 424 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 IGKV3-15P01624 115 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 HNF4AP41235 474 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 CDC16Q13042 620 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 HNRNPDQ14103 355 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 FGFBP1Q14512 234 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 SLC9B1Q4ZJI4 515 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 TAF1BQ53T94 588 aaPredicted RBP2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 CYP4A22Q5TCH4 519 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 ATG16L1Q676U5 607 aa2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 CCSAPQ6IQ19 270 aaPredicted RBP2.31□□□□□ -2.04
ECHDC1-219ENST00000526299 GPRIN3Q6ZVF9 776 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms