RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-211ENST00000525970 OR14J1Q9UGF5 321 aa4.52□□□□□ -1.69
CSDE1-211ENST00000525970 TSPYL4Q9UJ04 414 aa4.52□□□□□ -1.69
CSDE1-211ENST00000525970 KNSTRNQ9Y448 316 aa4.52□□□□□ -1.69
CSDE1-211ENST00000525970 ANXA2P2A6NMY6 339 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 A6NNC1 897 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 ENO4A6NNW6 628 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 STMND1H3BQB6 276 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 SOCS2O14508 198 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 CLIC2O15247 247 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 HTATSF1O43719 755 aaKnown RBP4.51□□□□□ -1.69
CSDE1-211ENST00000525970 ATG13O75143 517 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 CNOT3O75175 753 aaKnown RBP4.51□□□□□ -1.69
CSDE1-211ENST00000525970 SLC22A3O75751 556 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 ZWINTO95229 277 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 LINGO3P0C6S8 592 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 TMEM191BP0C7N4 346 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 DDX5P17844 614 aaKnown RBP4.51□□□□□ -1.69
CSDE1-211ENST00000525970 CD58P19256 250 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 CCKBRP32239 447 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 LIMK1P53667 647 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 CDH12P55289 794 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 SCN1BQ07699 218 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 DUSP6Q16828 381 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 LEXMQ3ZCV2 418 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 KRTCAP3Q53RY4 240 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 DCAF6Q58WW2 860 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 ODF2Q5BJF6 829 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 C6orf136Q5SQH8 315 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 C6orf10Q5SRN2 563 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 C6orf163Q5TEZ5 329 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 GGNBP1Q5YKI7 109 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 NSUN5P2Q63ZY6 315 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 FAM198BQ6UWH4 519 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 INTS8Q75QN2 995 aaKnown RBP4.51□□□□□ -1.69
CSDE1-211ENST00000525970 OTOAQ7RTW8 1153 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 IRF2BP2Q7Z5L9 587 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 CCDC91Q7Z6B0 441 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 PATL1Q86TB9 770 aaKnown RBP4.51□□□□□ -1.69
CSDE1-211ENST00000525970 UNC45BQ8IWX7 931 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 MB21D2Q8IYB1 491 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-211ENST00000525970 ARL10Q8N8L6 244 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 NRACQ8N912 160 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 IQUBQ8NA54 791 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 ARRDC2Q8TBH0 407 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 SPACA9Q96E40 222 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-211ENST00000525970 GFI1Q99684 422 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 PI4K2AQ9BTU6 479 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 FOXP1Q9H334 677 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-211ENST00000525970 DDX43Q9NXZ2 648 aaKnown RBP4.51□□□□□ -1.69
CSDE1-211ENST00000525970 HEY2Q9UBP5 337 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-211ENST00000525970 SQORQ9Y6N5 450 aa4.51□□□□□ -1.69
CSDE1-211ENST00000525970 IGSF1Q8N6C5 1336 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 FEZF1A0PJY2 475 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 M0QZ24 198 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 SUPT20HL2P0C7V6 817 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 PFKFB1P16118 471 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 GNLYP22749 145 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 TNFRSF8P28908 595 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 ME1P48163 572 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 BMXP51813 675 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 TMPRSS3P57727 454 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-211ENST00000525970 HNRNPKP61978 463 aaKnown RBP eCLIP4.5□□□□□ -1.69
CSDE1-211ENST00000525970 YWHAHQ04917 246 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-211ENST00000525970 ST3GAL1Q11201 340 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 MTX1Q13505 466 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 PTPRCAPQ14761 206 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 VWC2Q2TAL6 325 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 FAM98BQ52LJ0 330 aaKnown RBP4.5□□□□□ -1.69
CSDE1-211ENST00000525970 PLA2G4FQ68DD2 849 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 LINC00696Q6ZRV3 163 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 MSANTD1Q6ZTZ1 278 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 ADCK2Q7Z695 626 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 DSG4Q86SJ6 1040 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 NRROSQ86YC3 692 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 TMCO5AQ8N6Q1 288 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 ENGASEQ8NFI3 743 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 OR1J2Q8NGS2 313 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 HM13Q8TCT9 377 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 CCDC114Q96M63 670 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 NEK1Q96PY6 1258 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 SLC22A12Q96S37 553 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 SH3GL2Q99962 352 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 TRMOQ9BU70 441 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 SPRY4Q9C004 299 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 CLK4Q9HAZ1 481 aaKnown RBP4.5□□□□□ -1.69
CSDE1-211ENST00000525970 SIRT3Q9NTG7 399 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-211ENST00000525970 COQ3Q9NZJ6 369 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 SLC9A2Q9UBY0 812 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 PCDHGA5Q9Y5G8 931 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 HS3ST3B1Q9Y662 390 aa4.5□□□□□ -1.69
CSDE1-211ENST00000525970 GTPBP10A4D1E9 387 aaKnown RBP4.49□□□□□ -1.69
CSDE1-211ENST00000525970 HTR3EA5X5Y0 456 aa4.49□□□□□ -1.69
CSDE1-211ENST00000525970 GAGE12JA6NER3 117 aa4.49□□□□□ -1.69
CSDE1-211ENST00000525970 ZNF814B7Z6K7 855 aa4.49□□□□□ -1.69
CSDE1-211ENST00000525970 PTGESO14684 152 aa4.49□□□□□ -1.69
CSDE1-211ENST00000525970 MDM4O15151 490 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms