RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CES3Q6UWW8 571 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 ZYG11AQ6WRX3 759 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 PRR23CQ6ZRP0 262 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 FAM47EQ6ZV65 393 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 CYP2U1Q7Z449 544 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 TBC1D1Q86TI0 1168 aaPredicted RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 TMPRSS6Q8IU80 811 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 SLC41A1Q8IVJ1 513 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 SLC22A9Q8IVM8 553 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 CBARPQ8N350 705 aaPredicted RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 CHCHD4Q8N4Q1 142 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 PCDH20Q8N6Y1 951 aaKnown RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 OR4L1Q8NH43 312 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 RHEBL1Q8TAI7 183 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 PIWIL2Q8TC59 973 aaKnown RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 GRIN3AQ8TCU5 1115 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 HCAR2Q8TDS4 363 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 PIGKQ92643 395 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 INPP5DQ92835 1189 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 MYO19Q96H55 970 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 LRIG1Q96JA1 1093 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 ZC3H10Q96K80 434 aaKnown RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 ZNF641Q96N77 438 aaPredicted RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 KLF6Q99612 283 aaPredicted RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 TMEM245Q9H330 911 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 SLCO1B3Q9NPD5 702 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 PRSS16Q9NQE7 514 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 CATSPERZQ9NTU4 200 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 TMEM74BQ9NUR3 256 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 PIH1D1Q9NWS0 290 aaKnown RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 OXSMQ9NWU1 459 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 NFKBIL1Q9UBC1 381 aaPredicted RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 SLCO3A1Q9UIG8 710 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 GGT7Q9UJ14 662 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 PLA2G4CQ9UP65 541 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 ERVW-1Q9UQF0 538 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 RAI2Q9Y5P3 530 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 GPR179Q6PRD1 2367 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 ZNF106Q9H2Y7 1883 aaKnown RBP7.02□□□□□ -1.28
VPS11-201ENST00000524454 F8W8V4 182 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 G3V2L1 256 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 H3BMM5 538 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 SLC22A2O15244 555 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 CD3EAPO15446 510 aaKnown RBP7.02□□□□□ -1.29
VPS11-201ENST00000524454 BNIP3LO60238 219 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 NPHS1O60500 1241 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 SNAP91O60641 907 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 CCDC22O60826 627 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 TRIM13O60858 407 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 UNC5CO95185 931 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 PGLSO95336 258 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 PRKCGP05129 697 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 MYL2P10916 166 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 RALBP11234 206 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 FGF3P11487 239 aaPredicted RBP7.02□□□□□ -1.29
VPS11-201ENST00000524454 BGNP21810 368 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 FDXRP22570 491 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 GLDCP23378 1020 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 ATP5F1P24539 256 aaPredicted RBP7.02□□□□□ -1.29
VPS11-201ENST00000524454 MAOBP27338 520 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 SCTRP47872 440 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 ID4P47928 161 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 SMCPP49901 116 aaPredicted RBP7.02□□□□□ -1.29
VPS11-201ENST00000524454 TPMTP51580 245 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 METAP1P53582 386 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 ATP6V0D1P61421 351 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 ST8SIA6P61647 398 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 RPS14P62263 151 aaKnown RBP7.02□□□□□ -1.29
VPS11-201ENST00000524454 SNRPD1P62314 119 aaKnown RBP7.02□□□□□ -1.29
VPS11-201ENST00000524454 ECT2LQ008S8 904 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 RAD51Q06609 339 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 VAC14Q08AM6 782 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 CAMK2GQ13555 558 aaPredicted RBP7.02□□□□□ -1.29
VPS11-201ENST00000524454 KRT72Q14CN4 511 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 E2F5Q15329 346 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 CSRP2Q16527 193 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 POM121L1PQ3SYA9 428 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 GPR33Q49SQ1 333 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 AASDHQ4L235 1098 aaPredicted RBP7.02□□□□□ -1.29
VPS11-201ENST00000524454 SH2D4BQ5SQS7 431 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 ARMC12Q5T9G4 340 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 METTL21CQ5VZV1 264 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 RAPH1Q70E73 1250 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 LPCAT2Q7L5N7 544 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 GLT6D1Q7Z4J2 308 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 CENPLQ8N0S6 344 aaPredicted RBP7.02□□□□□ -1.29
VPS11-201ENST00000524454 TTC30BQ8N4P2 665 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 SLC25A41Q8N5S1 370 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 FITM2Q8N6M3 262 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 OR2AP1Q8NGE2 309 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 PPP1R14CQ8TAE6 165 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 KCNJ9Q92806 393 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 HDAC10Q969S8 669 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.02□□□□□ -1.29
VPS11-201ENST00000524454 SKA1Q96BD8 255 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 ECHDC3Q96DC8 303 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 SIPA1Q96FS4 1042 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 TOE1Q96GM8 510 aaKnown RBP7.02□□□□□ -1.29
VPS11-201ENST00000524454 CDKN2AIPNLQ96HQ2 116 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 HSPA12BQ96MM6 686 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms