RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 MRPS23Q9Y3D9 190 aaKnown RBP7.79□□□□□ -1.16
SPIDR-223ENST00000524033 AP4S1Q9Y587 144 aa7.79□□□□□ -1.16
SPIDR-223ENST00000524033 CROCCQ5TZA2 2017 aa7.79□□□□□ -1.16
SPIDR-223ENST00000524033 ARHGEF37A1IGU5 675 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 SLC35F4A4IF30 521 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 A8MT66 165 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 HHLA1C9JL84 531 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ZNF197O14709 1029 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 GABRDO14764 452 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 CFLARO15519 480 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ZSCAN9O15535 394 aaPredicted RBP7.78□□□□□ -1.16
SPIDR-223ENST00000524033 BEST1O76090 585 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 SRP72O76094 671 aaKnown RBP7.78□□□□□ -1.16
SPIDR-223ENST00000524033 SEC24AO95486 1093 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 LRG1P02750 347 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 AHSGP02765 367 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 DCNP07585 359 aaKnown RBP7.78□□□□□ -1.16
SPIDR-223ENST00000524033 RHOP08100 348 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 PDGFRBP09619 1106 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ATP6V1B2P21281 511 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 MYF6P23409 242 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 LRPAP1P30533 357 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 MSX2P35548 267 aaPredicted RBP7.78□□□□□ -1.16
SPIDR-223ENST00000524033 GNL1P36915 607 aaPredicted RBP7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ACADVLP49748 655 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 TAF6P49848 677 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 NDST2P52849 883 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 PGGT1BP53609 377 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ADARP55265 1226 aaKnown RBP7.78□□□□□ -1.16
SPIDR-223ENST00000524033 TAS2R39P59534 338 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 MPP1Q00013 466 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 CTBSQ01459 385 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 STX5Q13190 355 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 FASTKQ14296 549 aaKnown RBP7.78□□□□□ -1.16
SPIDR-223ENST00000524033 SV2CQ496J9 727 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 CTXN3Q4LDR2 81 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 SLC44A4Q53GD3 710 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 DCAF6Q58WW2 860 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 RAB41Q5JT25 222 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 SAMD4BQ5PRF9 694 aaKnown RBP7.78□□□□□ -1.16
SPIDR-223ENST00000524033 MANEALQ5VSG8 457 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 TPGS2Q68CL5 300 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ISLR2Q6UXK2 745 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 LPCAT2Q7L5N7 544 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 EPHX4Q8IUS5 362 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ARHGAP12Q8IWW6 846 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 NPAS3Q8IXF0 933 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 SCML4Q8N228 414 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 BBS5Q8N3I7 341 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 GALNT4Q8N4A0 578 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 DNAAF3Q8N9W5 541 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 B3GALNT2Q8NCR0 500 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 FAM156AQ8NDB6 213 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ZMIZ2Q8NF64 920 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 FNDC8Q8TC99 324 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ING5Q8WYH8 240 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 TFAP2CQ92754 450 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 TMIGD2Q96BF3 282 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 FAM149B1Q96BN6 582 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 TMA16Q96EY4 203 aaKnown RBP7.78□□□□□ -1.16
SPIDR-223ENST00000524033 TNIP3Q96KP6 325 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 FCRL5Q96RD9 977 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 CYP2S1Q96SQ9 504 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 IL12RB2Q99665 862 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 CCT7Q99832 543 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 TBL1YQ9BQ87 522 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 KXD1Q9BQD3 176 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ULBP1Q9BZM6 244 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 SNX25Q9H3E2 840 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 GSTO2Q9H4Y5 243 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 VPS45Q9NRW7 570 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 DDX18Q9NVP1 670 aaKnown RBP7.78□□□□□ -1.16
SPIDR-223ENST00000524033 FAIMQ9NVQ4 179 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 RRN3Q9NYV6 651 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 MAFFQ9ULX9 164 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 SLC8A2Q9UPR5 921 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 MYRFQ9Y2G1 1151 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ACOT9Q9Y305 439 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 TCAF1Q9Y4C2 921 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 ZNF292O60281 2723 aa7.78□□□□□ -1.16
SPIDR-223ENST00000524033 DNAH14Q0VDD8 3507 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 ZFC3H1O60293 1989 aaKnown RBP7.77□□□□□ -1.17
SPIDR-223ENST00000524033 DYTNA2CJ06 578 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 AQP12BA6NM10 295 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 FAM170BA6NMN3 283 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 BBIP1A8MTZ0 92 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 FXYD1O00168 92 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 CLDN5O00501 218 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 MRASO14807 208 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 KHNYNO15037 678 aaKnown RBP7.77□□□□□ -1.17
SPIDR-223ENST00000524033 ATXN7O15265 892 aaPredicted RBP7.77□□□□□ -1.17
SPIDR-223ENST00000524033 AKAP10O43572 662 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 ECI2O75521 394 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 OAZ2O95190 189 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 IGLV3-25P01717 112 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 RPLP1P05386 114 aaKnown RBP7.77□□□□□ -1.17
SPIDR-223ENST00000524033 SNRPB2P08579 225 aaKnown RBP7.77□□□□□ -1.17
SPIDR-223ENST00000524033 HSD17B1P14061 328 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 ARSAP15289 507 aa7.77□□□□□ -1.17
SPIDR-223ENST00000524033 STMN1P16949 149 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms