RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 PLPP2O43688 288 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 BUD23O43709 281 aaKnown RBP3.84□□□□□ -1.79
SKP1-212ENST00000523966 CSPG5O95196 566 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 PAPSS2O95340 614 aaPredicted RBP3.84□□□□□ -1.79
SKP1-212ENST00000523966 PGM3O95394 542 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 HNRNPCL4P0DMR1 293 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 TRIM21P19474 475 aaKnown RBP3.84□□□□□ -1.79
SKP1-212ENST00000523966 USP8P40818 1118 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 HTR6P50406 440 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 SUOXP51687 545 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 CTSCP53634 463 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 TERF1P54274 439 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 LINC00205P59089 165 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 CD81P60033 236 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 DLG1Q12959 904 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 TRAF3Q13114 568 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 PLEKHM3Q6ZWE6 761 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 PM20D2Q8IYS1 436 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 ZNF34Q8IZ26 560 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 GCSAMQ8N6F7 178 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 POGLUT1Q8NBL1 392 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 NEXN-AS1Q8NBZ9 246 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 ZNF114Q8NC26 417 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 RDM1Q8NG50 284 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 RHBDF1Q96CC6 855 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 TMCO6Q96DC7 493 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 ZNF479Q96JC4 524 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 CNDP2Q96KP4 475 aaKnown RBP3.84□□□□□ -1.79
SKP1-212ENST00000523966 DUX5Q96PT3 197 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 HGH1Q9BTY7 390 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 TXLNGYQ9BZA5 131 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 SPATC1LQ9H0A9 340 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 LRMDAQ9H2I8 198 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 HIPK2Q9H2X6 1198 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 KCNK15Q9H427 330 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 TRMT1Q9NXH9 659 aaKnown RBP3.84□□□□□ -1.79
SKP1-212ENST00000523966 C1RLQ9NZP8 487 aa3.84□□□□□ -1.79
SKP1-212ENST00000523966 BCCIPQ9P287 314 aaKnown RBP eCLIP3.84□□□□□ -1.79
SKP1-212ENST00000523966 LARSQ9P2J5 1176 aaKnown RBP3.84□□□□□ -1.79
SKP1-212ENST00000523966 SETD1BQ9UPS6 1966 aaKnown RBP3.83□□□□□ -1.8
SKP1-212ENST00000523966 MAGEA13PA6NCF6 341 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 TMEM8BA6NDV4 472 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 HNRNPCL2B2RXH8 293 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 TMEM189-UBE2V1I3L0A0 370 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 J3QR06 171 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 ADAMDEC1O15204 470 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 MID1O15344 667 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 ADAM20O43506 726 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 PRAMEF11O60813 436 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 ZNF217O75362 1048 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 ZWINTO95229 277 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 PMS2P2O95744 297 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 BCL10O95999 233 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 PRLRP16471 622 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 S1PR1P21453 382 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 KCNA5P22460 613 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 HRH2P25021 359 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 EEF1DP29692 281 aaKnown RBP3.83□□□□□ -1.8
SKP1-212ENST00000523966 CORO1AP31146 461 aaKnown RBP3.83□□□□□ -1.8
SKP1-212ENST00000523966 CLDN20P56880 219 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 DSCR9P59020 149 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 SNRPEP62304 92 aaKnown RBP3.83□□□□□ -1.8
SKP1-212ENST00000523966 SIRPAP78324 504 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 COG7P83436 770 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 PLIN5Q00G26 463 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 UBE2V1Q13404 147 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 SNTA1Q13424 505 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 GRAPQ13588 217 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 MVPQ14764 893 aaKnown RBP3.83□□□□□ -1.8
SKP1-212ENST00000523966 NFATC4Q14934 902 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 SYT16Q17RD7 645 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 KIF19Q2TAC6 998 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 FAM98BQ52LJ0 330 aaKnown RBP3.83□□□□□ -1.8
SKP1-212ENST00000523966 C9orf152Q5JTZ5 239 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 ZNF704Q6ZNC4 412 aaPredicted RBP3.83□□□□□ -1.8
SKP1-212ENST00000523966 HAUS6Q7Z4H7 955 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 AACSQ86V21 672 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 NRROSQ86YC3 692 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 SPATA2LQ8IUW3 424 aaPredicted RBP3.83□□□□□ -1.8
SKP1-212ENST00000523966 GUF1Q8N442 669 aaKnown RBP3.83□□□□□ -1.8
SKP1-212ENST00000523966 TTC30BQ8N4P2 665 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 SLC38A9Q8NBW4 561 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 KCTD6Q8NC69 237 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 CCDC191Q8NCU4 936 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 ACVR1CQ8NER5 493 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 TSPAN14Q8NG11 270 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 DUSP19Q8WTR2 217 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 NUDCD2Q8WVJ2 157 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 FIG4Q92562 907 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 ZNF622Q969S3 477 aaKnown RBP eCLIP3.83□□□□□ -1.82e-20■□□□□ 9.4
SKP1-212ENST00000523966 BICD1Q96G01 975 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 ABHD1Q96SE0 405 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 NEURL2Q9BR09 285 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 RABEP2Q9H5N1 569 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 DENND2DQ9H6A0 471 aaPredicted RBP3.83□□□□□ -1.8
SKP1-212ENST00000523966 C6orf106Q9H6K1 298 aaPredicted RBP3.83□□□□□ -1.8
SKP1-212ENST00000523966 TCP11L1Q9NUJ3 509 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 TSPYL4Q9UJ04 414 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 KCNS2Q9ULS6 477 aa3.83□□□□□ -1.8
SKP1-212ENST00000523966 PRAG1Q86YV5 1406 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms