RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	TMEM160	Q9NX00	188 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	EXTL2	Q9UBQ6	330 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636		Q9UFV3	132 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	PCDHA6	Q9UN73	950 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	EXOC7	Q9UPT5	735 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	CAB39	Q9Y376	341 aa	Predicted RBP	5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	ENTPD2	Q9Y5L3	495 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	RAD54B	Q9Y620	910 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	AKAP6	Q13023	2319 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	LY6G6E	A0A0G2JKS1	128 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636		A0A0G2JPF8	293 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	CTAGE9	A4FU28	777 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	C9orf118	A6NHY6	69 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	HNRNPCL3	B7ZW38	293 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	IKBKB	O14920	756 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	TRIM24	O15164	1050 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	POLR3G	O15318	223 aa	Predicted RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	B4GALT5	O43286	388 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	VPS4B	O75351	444 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	PIAS2	O75928	621 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	BEST1	O76090	585 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	KLHL18	O94889	574 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	SCGB1D1	O95968	90 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZFY	P08048	801 aa	Predicted RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	HNRNPCL4	P0DMR1	293 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	IFNAR1	P17181	557 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	ARF4	P18085	180 aa	Predicted RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	ATF6	P18850	670 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	AGXT	P21549	392 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	EPHA8	P29322	1005 aa	Predicted RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	HNMT	P50135	292 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	PDX1	P52945	283 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	CDC42EP1	Q00587	391 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	MC1R	Q01726	317 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	KDSR	Q06136	332 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	CHAF1B	Q13112	559 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZNF268	Q14587	947 aa	Predicted RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	EIF4H	Q15056	248 aa	Known RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	SYCP1	Q15431	976 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	ISX	Q2M1V0	245 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	ADCK5	Q3MIX3	580 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	BOLA3	Q53S33	107 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	CT83	Q5H943	113 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	AP1AR	Q63HQ0	302 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	SP5	Q6BEB4	398 aa	Predicted RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	ARHGAP11A	Q6P4F7	1023 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	TMTC3	Q6ZXV5	915 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	KCNK18	Q7Z418	384 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	SZRD1	Q7Z422	152 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	KRTAP1-3	Q8IUG1	177 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	CDYL2	Q8N8U2	506 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	OR14C36	Q8NHC7	312 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	ETNPPL	Q8TBG4	499 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	STT3B	Q8TCJ2	826 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	LRRC15	Q8TF66	581 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	RNF139	Q8WU17	664 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	PIBF1	Q8WXW3	757 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	GIMAP5	Q96F15	307 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	HIST1H2AH	Q96KK5	128 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	RMDN2	Q96LZ7	410 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	HIST1H2AJ	Q99878	128 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	C6orf106	Q9H6K1	298 aa	Predicted RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	KAT14	Q9H8E8	782 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	L2HGDH	Q9H9P8	463 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	KIF9	Q9HAQ2	790 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	PNPLA8	Q9NP80	782 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	DECR2	Q9NUI1	292 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	DDX19A	Q9NUU7	478 aa	Known RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	AKAP7	Q9P0M2	348 aa	Predicted RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	UBA2	Q9UBT2	640 aa	Predicted RBP	5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	PRSS50	Q9UI38	385 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	SLC39A10	Q9ULF5	831 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	VPS4A	Q9UN37	437 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	MTMR6	Q9Y217	621 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	TMEM5	Q9Y2B1	443 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	VWA7	Q9Y334	891 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	PCDHB6	Q9Y5E3	794 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636		U3KQA8	63 aa		5.18	□□□□□ -1.58
PABPC1-223	ENST00000523636	HYDIN	Q4G0P3	5121 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636		A0A0U1RQK1	487 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636		A0A1B0GVM2	712 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636		A0A1W2PPC4	97 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZNF320	A2RRD8	509 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	AQP12B	A6NM10	295 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	AGAP14	A8MT82	685 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	NPIPB6	E9PJ23	425 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636		F8W8V4	182 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	GTPBP1	O00178	669 aa	Known RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	FFAR3	O14843	346 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	PRICKLE3	O43900	615 aa	Predicted RBP	5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	NRP2	O60462	931 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	ADCY5	O95622	1261 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	STAMBP	O95630	424 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	CLEC2L	P0C7M8	214 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	GIMD1	P0DJR0	217 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	CSH1	P0DML2	217 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	CSH2	P0DML3	217 aa		5.17	□□□□□ -1.58
PABPC1-223	ENST00000523636	ACADM	P11310	421 aa		5.17	□□□□□ -1.58

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