RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ZNF569Q5MCW4 686 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 FHL5Q5TD97 284 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 CACHD1Q5VU97 1274 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 PPP1R3BQ86XI6 285 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 GPR26Q8NDV2 337 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 SPATA16Q9BXB7 569 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 BRD8Q9H0E9 1235 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 SLC40A1Q9NP59 571 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 HAUS2Q9NVX0 235 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 EPHA6Q9UF33 1036 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 IP6K2Q9UHH9 426 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 DNAJC16Q9Y2G8 782 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 CACNA1DQ01668 2161 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 C21orf140B9A014 251 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 MT-ND3P03897 115 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 ZNF7P17097 686 aaPredicted RBP22.35■■□□□ 1.17
PVT1-218ENST00000523328 NELFEP18615 380 aaKnown RBP22.35■■□□□ 1.17
PVT1-218ENST00000523328 CASP14P31944 242 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 GPR18Q14330 331 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 SEPT7Q16181 437 aaKnown RBP22.35■■□□□ 1.17
PVT1-218ENST00000523328 CCDC183Q5T5S1 534 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 ALS2CLQ60I27 953 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 ABRAXAS1Q6UWZ7 409 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 FAM92BQ6ZTR7 304 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 ZNF547Q8IVP9 402 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 EFCAB3Q8N7B9 438 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 CPT1CQ8TCG5 803 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 RUFY1Q96T51 708 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 ZSCAN5AQ9BUG6 496 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 ACTL8Q9H568 366 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 AKIRIN1Q9H9L7 192 aaPredicted RBP22.35■■□□□ 1.17
PVT1-218ENST00000523328 ANAPC7Q9UJX3 599 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 HIVEP3Q5T1R4 2406 aa22.35■■□□□ 1.17
PVT1-218ENST00000523328 OR52A4PA6NMU1 304 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 PDZK1P1A8MUH7 402 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 KMOO15229 486 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 RPL10P27635 214 aaKnown RBP22.34■■□□□ 1.17
PVT1-218ENST00000523328 CD86P42081 329 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 DCDC1P59894 354 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 ATP13A4Q4VNC1 1196 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 LRRTM4Q86VH4 590 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 GLYATL1Q969I3 302 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 TIMM29Q9BSF4 260 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 RAB33BQ9H082 229 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 THAP2Q9H0W7 228 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 ZFYVE1Q9HBF4 777 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 SEMA5BQ9P283 1151 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 NFKBIL1Q9UBC1 381 aaPredicted RBP22.34■■□□□ 1.17
PVT1-218ENST00000523328 GTF3C3Q9Y5Q9 886 aa22.34■■□□□ 1.17
PVT1-218ENST00000523328 RNF224P0DH78 156 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 PPP1CAP62136 330 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 GALNT3Q14435 633 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 IRGCQ6NXR0 463 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 WASH2PQ6VEQ5 465 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 CLEC17AQ6ZS10 378 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 RBM12BQ8IXT5 1001 aaKnown RBP22.33■■□□□ 1.17
PVT1-218ENST00000523328 TRAM1L1Q8N609 369 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 SSC4DQ8WTU2 575 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 ZDHHC12Q96GR4 267 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 NUP85Q9BW27 656 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 ADGRE3Q9BY15 652 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 MLXIPLQ9NP71 852 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 WASH6PQ9NQA3 447 aa22.33■■□□□ 1.17
PVT1-218ENST00000523328 ITPR2Q14571 2701 aa22.33■■□□□ 1.16
PVT1-218ENST00000523328 CREBBPQ92793 2442 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 MTX2O75431 263 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 GBE1Q04446 702 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 SLC10A2Q12908 348 aaPredicted RBP22.32■■□□□ 1.16
PVT1-218ENST00000523328 LAMB3Q13751 1172 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 UGT8Q16880 541 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 NADK2Q4G0N4 442 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 KHDC1Q4VXA5 237 aaKnown RBP22.32■■□□□ 1.16
PVT1-218ENST00000523328 AGAP9Q5VTM2 703 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 CPZQ66K79 652 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 PDPK2PQ6A1A2 396 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 PWWP2BQ6NUJ5 590 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 CYB5D1Q6P9G0 228 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 TMC3Q7Z5M5 1100 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 CNTD1Q8N815 330 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 HDAC11Q96DB2 347 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 SLC41A2Q96JW4 573 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 FCRL4Q96PJ5 515 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 TRIB3Q96RU7 358 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 ZNF670Q9BS34 389 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 PDE7BQ9NP56 450 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 SHOC2Q9UQ13 582 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 MAP4K5Q9Y4K4 846 aa22.32■■□□□ 1.16
PVT1-218ENST00000523328 PCDHGA9Q9Y5G4 932 aaKnown RBP22.32■■□□□ 1.16
PVT1-218ENST00000523328 IGHV5-51A0A0C4DH38 117 aa22.31■■□□□ 1.16
PVT1-218ENST00000523328 SEMA7AO75326 666 aa22.31■■□□□ 1.16
PVT1-218ENST00000523328 SORBS2O94875 1100 aaKnown RBP22.31■■□□□ 1.16
PVT1-218ENST00000523328 JCHAINP01591 159 aa22.31■■□□□ 1.16
PVT1-218ENST00000523328 CYP1A2P05177 515 aa22.31■■□□□ 1.16
PVT1-218ENST00000523328 PIRTP0C851 137 aa22.31■■□□□ 1.16
PVT1-218ENST00000523328 FOLR1P15328 257 aa22.31■■□□□ 1.16
PVT1-218ENST00000523328 DRG2P55039 364 aaKnown RBP22.31■■□□□ 1.16
PVT1-218ENST00000523328 RPS18P62269 152 aaKnown RBP22.31■■□□□ 1.16
PVT1-218ENST00000523328 TUBB3Q13509 450 aa22.31■■□□□ 1.16
PVT1-218ENST00000523328 FAM199XQ6PEV8 388 aaPredicted RBP22.31■■□□□ 1.16
PVT1-218ENST00000523328 C11orf96Q7Z7L8 435 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms