RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 RGS7BPQ6MZT1 257 aaPredicted RBP6.06□□□□□ -1.44
PABPC1-216ENST00000520868 CXorf57Q6NSI4 855 aaKnown RBP6.06□□□□□ -1.44
PABPC1-216ENST00000520868 EPM2AIP1Q7L775 607 aaPredicted RBP6.06□□□□□ -1.44
PABPC1-216ENST00000520868 NAXDQ8IW45 347 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 ZMIZ2Q8NF64 920 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 SEMA6DQ8NFY4 1073 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 SLC2A14Q8TDB8 520 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 SETD7Q8WTS6 366 aaKnown RBP6.06□□□□□ -1.44
PABPC1-216ENST00000520868 DHX58Q96C10 678 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 SMARCD1Q96GM5 515 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 TNIP3Q96KP6 325 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 GABRG3Q99928 467 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 GPR174Q9BXC1 333 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 LRRC27Q9C0I9 530 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 SDCBP2Q9H190 292 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 BLZF1Q9H2G9 400 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 TNMDQ9H2S6 317 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 FAM124BQ9H5Z6 455 aaPredicted RBP6.06□□□□□ -1.44
PABPC1-216ENST00000520868 NMUR1Q9HB89 426 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 DMAP1Q9NPF5 467 aaPredicted RBP6.06□□□□□ -1.44
PABPC1-216ENST00000520868 TLR8Q9NR97 1041 aaKnown RBP6.06□□□□□ -1.44
PABPC1-216ENST00000520868 FAM49BQ9NUQ9 324 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 COMMD8Q9NX08 183 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 PLK2Q9NYY3 685 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 LSM7Q9UK45 103 aaKnown RBP6.06□□□□□ -1.44
PABPC1-216ENST00000520868 NDRG4Q9ULP0 352 aaKnown RBP6.06□□□□□ -1.44
PABPC1-216ENST00000520868 PAXBP1Q9Y5B6 917 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 FREM2Q5SZK8 3169 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 KIAA1549LQ6ZVL6 1849 aa6.06□□□□□ -1.44
PABPC1-216ENST00000520868 CELSR3Q9NYQ7 3312 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 PTPRDP23468 1912 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 ADAMTS9Q9P2N4 1935 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 NBEAQ8NFP9 2946 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 FAM92AA1XBS5 289 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 LINC01548A6NM66 108 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 LRRIQ3A6PVS8 624 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-216ENST00000520868 CACNG3O60359 315 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 GJB3O75712 270 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 VNN1O95497 513 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 HMBSP08397 361 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 RARGP13631 454 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 ATP5C1P36542 298 aaKnown RBP6.05□□□□□ -1.44
PABPC1-216ENST00000520868 LIPAP38571 399 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 TUBP50607 506 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 NDST1P52848 882 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 EEFSECP57772 596 aaKnown RBP6.05□□□□□ -1.44
PABPC1-216ENST00000520868 SNRPFP62306 86 aaKnown RBP6.05□□□□□ -1.44
PABPC1-216ENST00000520868 GRIK2Q13002 908 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 CUL4AQ13619 759 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 STARD3Q14849 445 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 LLGL1Q15334 1064 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 FUT11Q495W5 492 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 SOWAHCQ53LP3 525 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-216ENST00000520868 C10orf120Q5SQS8 335 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 DCAF12L1Q5VU92 463 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 SPOPLQ6IQ16 392 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 MARCH9Q86YJ5 346 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 ZCCHC9Q8N567 271 aaKnown RBP6.05□□□□□ -1.44
PABPC1-216ENST00000520868 C12orf29Q8N999 325 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 RP9Q8TA86 221 aaKnown RBP6.05□□□□□ -1.44
PABPC1-216ENST00000520868 ADAMTS14Q8WXS8 1223 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 ATG4AQ8WYN0 398 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 TRIM54Q9BYV2 358 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 FBXO44Q9H4M3 255 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 GAREM1Q9H706 876 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 UPF2Q9HAU5 1272 aaKnown RBP6.05□□□□□ -1.44
PABPC1-216ENST00000520868 PRDM16Q9HAZ2 1276 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 IL21RQ9HBE5 538 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 ITM2CQ9NQX7 267 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 OSER1Q9NX31 292 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 WSB2Q9NYS7 404 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-216ENST00000520868 HMGXB4Q9UGU5 601 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 STON1Q9Y6Q2 735 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 ASXL3Q9C0F0 2248 aa6.05□□□□□ -1.44
PABPC1-216ENST00000520868 HELZP42694 1942 aaKnown RBP6.04□□□□□ -1.44
PABPC1-216ENST00000520868 A0A087WWL8 130 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 WIPF3A6NGB9 483 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 KCNJ18B7U540 433 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 H0YIZ8 118 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 SPTLC2O15270 562 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 PHGDHO43175 533 aaKnown RBP6.04□□□□□ -1.44
PABPC1-216ENST00000520868 FAM200BP0CF97 657 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 ACADMP11310 421 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 P4HA1P13674 534 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 CLCN2P51788 898 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 AGFG1P52594 562 aaKnown RBP6.04□□□□□ -1.44
PABPC1-216ENST00000520868 ARFIP2P53365 341 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 AP3M2P53677 418 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 BNC1Q01954 994 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 GOLGA8FQ08AF8 430 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 GOLGA8DPQ0D2H9 430 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 SGSM1Q2NKQ1 1148 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 CCNI2Q6ZMN8 369 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-216ENST00000520868 CLEC20AQ6ZU45 233 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 UNC13DQ70J99 1090 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 CACUL1Q86Y37 369 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 SLC15A3Q8IY34 581 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 CRYBG2Q8N1P7 616 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 IQUBQ8NA54 791 aa6.04□□□□□ -1.44
PABPC1-216ENST00000520868 LINC00301Q8NCQ3 95 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms