RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 SPO11Q9Y5K1 396 aa14.95□□□□□ -0.02
CSMD1-207ENST00000520451 LOC101059948A0A1B0GTJ6 334 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 TERTO14746 1132 aaKnown RBP14.94□□□□□ -0.02
CSMD1-207ENST00000520451 AURKAO14965 403 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 POLR1CO15160 346 aaPredicted RBP14.94□□□□□ -0.02
CSMD1-207ENST00000520451 SUV39H1O43463 412 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 SPOPO43791 374 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 VEGFDO43915 354 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 MFAP3LO75121 409 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 UBXN7O94888 489 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 CDK14O94921 469 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 ANKRD34CP0C6C1 535 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 PRKAR1AP10644 381 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 TYRP1P17643 537 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 XRCC1P18887 633 aaPredicted RBP14.94□□□□□ -0.02
CSMD1-207ENST00000520451 PTPN3P26045 913 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 SLC19A1P41440 591 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 SLC1A1P43005 524 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 CSRP3P50461 194 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 KCNAB2Q13303 367 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 PRKD1Q15139 912 aaPredicted RBP14.94□□□□□ -0.02
CSMD1-207ENST00000520451 KHDC1Q4VXA5 237 aaKnown RBP14.94□□□□□ -0.02
CSMD1-207ENST00000520451 MFSD7Q6UXD7 560 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 ZNF547Q8IVP9 402 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 VSTM4Q8IW00 320 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 C9orf72Q96LT7 481 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 CATSPER2Q96P56 530 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 TGM7Q96PF1 710 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 SRPK1Q96SB4 655 aaKnown RBP14.94□□□□□ -0.02
CSMD1-207ENST00000520451 TIMM29Q9BSF4 260 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 BPIFA1Q9NP55 256 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 SIDT1Q9NXL6 827 aaKnown RBP14.94□□□□□ -0.02
CSMD1-207ENST00000520451 OGFRQ9NZT2 677 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 ZNF624Q9P2J8 865 aaPredicted RBP14.94□□□□□ -0.02
CSMD1-207ENST00000520451 SAE1Q9UBE0 346 aaPredicted RBP14.94□□□□□ -0.02
CSMD1-207ENST00000520451 IL17BQ9UHF5 180 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 TMEM184BQ9Y519 407 aaPredicted RBP14.94□□□□□ -0.02
CSMD1-207ENST00000520451 SLC30A1Q9Y6M5 507 aa14.94□□□□□ -0.02
CSMD1-207ENST00000520451 NKX2-8O15522 239 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 C9P02748 559 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 AMD1P17707 334 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 COMTP21964 271 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 RPL10P27635 214 aaKnown RBP14.93□□□□□ -0.02
CSMD1-207ENST00000520451 CCR10P46092 362 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 NR2C2P49116 596 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 FOXM1Q08050 763 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 ABHD18Q0P651 414 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 GTF2H3Q13889 308 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 TFDP2Q14188 446 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 LLGL1Q15334 1064 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 BZW1Q7L1Q6 419 aaKnown RBP14.93□□□□□ -0.02
CSMD1-207ENST00000520451 TRAPPC5Q8IUR0 188 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 GDAP1Q8TB36 358 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 TFB1MQ8WVM0 346 aaKnown RBP14.93□□□□□ -0.02
CSMD1-207ENST00000520451 TEKT5Q96M29 485 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 EFHD1Q9BUP0 239 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 TRIT1Q9H3H1 467 aaKnown RBP14.93□□□□□ -0.02
CSMD1-207ENST00000520451 TRIM10Q9UDY6 481 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 FAM153AQ9UHL3 310 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 TMPRSS11EQ9UL52 423 aa14.93□□□□□ -0.02
CSMD1-207ENST00000520451 PRR19A6NJB7 356 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 OR52A4PA6NMU1 304 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 F5H423 210 aaPredicted RBP14.92□□□□□ -0.02
CSMD1-207ENST00000520451 CST8O60676 142 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 RASSF9O75901 435 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 DLGAP3O95886 979 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 BRAFP15056 766 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 PECAM1P16284 738 aaPredicted RBP14.92□□□□□ -0.02
CSMD1-207ENST00000520451 VCLP18206 1134 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 PTMSP20962 102 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 CD68P34810 354 aaPredicted RBP14.92□□□□□ -0.02
CSMD1-207ENST00000520451 CDKN2BP42772 138 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 TNNT3P45378 269 aaPredicted RBP14.92□□□□□ -0.02
CSMD1-207ENST00000520451 SEPHS1P49903 392 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 DRG2P55039 364 aaKnown RBP14.92□□□□□ -0.02
CSMD1-207ENST00000520451 WNT3AP56704 352 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 CDC20Q12834 499 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 NOMO1Q15155 1222 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 ATP13A5Q4VNC0 1218 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 KAZNQ674X7 775 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 CXorf40BQ96DE9 158 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 RNF31Q96EP0 1072 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 VPS35Q96QK1 796 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 ULBP3Q9BZM4 244 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 POT1Q9NUX5 634 aa14.92□□□□□ -0.02
CSMD1-207ENST00000520451 NFKB1P19838 968 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 IDSP22304 550 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 HMGCLP35914 325 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 STAT5AP42229 794 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 CAPZBP47756 277 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 LEPRP48357 1165 aaKnown RBP14.91□□□□□ -0.02
CSMD1-207ENST00000520451 WASHC5Q12768 1159 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 TMEM115Q12893 351 aaPredicted RBP14.91□□□□□ -0.02
CSMD1-207ENST00000520451 TAZQ16635 292 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 SIRPB2Q5JXA9 342 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 AGAP9Q5VTM2 703 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 KDELC1Q6UW63 502 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 ABRAXAS1Q6UWZ7 409 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 WASH2PQ6VEQ5 465 aa14.91□□□□□ -0.02
CSMD1-207ENST00000520451 SPOCD1Q6ZMY3 1216 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms