RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PARP15Q460N3 678 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 PLEKHN1Q494U1 663 aaPredicted RBP4.83□□□□□ -1.64
SDCBP-207ENST00000520168 C4orf46Q504U0 113 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 COBLL1Q53SF7 1204 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 VWA2Q5GFL6 755 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 CCDC183Q5T5S1 534 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 OTUD1Q5VV17 481 aaPredicted RBP4.83□□□□□ -1.64
SDCBP-207ENST00000520168 DENND1BQ6P3S1 775 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 RPTNQ6XPR3 784 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ZNF662Q6ZS27 426 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ARCQ7LC44 396 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 PRSS42Q7Z5A4 293 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 CDH24Q86UP0 819 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 NLRP14Q86W24 1093 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ZNF354CQ86Y25 554 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 GALNT13Q8IUC8 556 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 CREBRFQ8IUR6 639 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ALDH16A1Q8IZ83 802 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 CISD2Q8N5K1 135 aaKnown RBP4.83□□□□□ -1.64
SDCBP-207ENST00000520168 MSANTD4Q8NCY6 345 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ADAMTS17Q8TE56 1095 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 PMM1Q92871 262 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 C14orf79Q96F83 325 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 OR2M4Q96R27 311 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 RANBP9Q96S59 729 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 CPXM1Q96SM3 734 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 NUDT9Q9BW91 350 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 SAP130Q9H0E3 1048 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 WASH6PQ9NQA3 447 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 ANLNQ9NQW6 1124 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 FRRS1LQ9P0K9 344 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 LUZP4Q9P127 313 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 KLHL42Q9P2K6 505 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 SUCOQ9UBS9 1254 aaKnown RBP4.83□□□□□ -1.64
SDCBP-207ENST00000520168 CNOT8Q9UFF9 292 aaKnown RBP4.83□□□□□ -1.64
SDCBP-207ENST00000520168 OR12D3Q9UGF7 316 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 KLHL3Q9UH77 587 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 CFAP45Q9UL16 551 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 RARRES3Q9UL19 164 aa4.83□□□□□ -1.64
SDCBP-207ENST00000520168 FARSAQ9Y285 508 aaKnown RBP4.83□□□□□ -1.64
SDCBP-207ENST00000520168 MDC1Q14676 2089 aaKnown RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 GOLGA6L4A6NEF3 574 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 I6L893 689 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ZNF185O15231 689 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 CBFA2T2O43439 604 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 BUB1BO60566 1050 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 DIAPH2O60879 1101 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RASSF9O75901 435 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 UBXN7O94888 489 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 KLK3P07288 261 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 CYP2A6P11509 494 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 NELFEP18615 380 aaKnown RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 HTR1EP28566 365 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 NOS3P29474 1203 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 MAPK9P45984 424 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 CAPZBP47756 277 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 GLRBP48167 497 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ACY1Q03154 408 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 DPTQ07507 201 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 BCL2L1Q07817 233 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RALGDSQ12967 914 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 CHAF1BQ13112 559 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 NFATC2Q13469 925 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 IL10RAQ13651 578 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 LAMB3Q13751 1172 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ZNF630Q2M218 657 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 PYCR3Q53H96 274 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 CRB2Q5IJ48 1285 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 MANEALQ5VSG8 457 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ICE2Q659A1 982 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 B3GNTL1Q67FW5 361 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RAET1GQ6H3X3 334 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RWDD4Q6NW29 188 aaKnown RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 IYDQ6PHW0 289 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ZNF517Q6ZMY9 492 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 Q6ZS92 163 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RRAGAQ7L523 313 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 BNIPLQ7Z465 357 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 FJX1Q86VR8 437 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 KCNMB4Q86W47 210 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 GAS2L3Q86XJ1 694 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ZNF761Q86XN6 746 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 XYLT1Q86Y38 959 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 KMT5CQ86Y97 462 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RAB43Q86YS6 212 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RBM12BQ8IXT5 1001 aaKnown RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RAVER1Q8IY67 606 aaKnown RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 MMP21Q8N119 569 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 CBARPQ8N350 705 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ZADH2Q8N4Q0 377 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ZNF808Q8N4W9 903 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ARFGAP1Q8N6T3 406 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 PAF1Q8N7H5 531 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 CLEC1AQ8NC01 280 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 OR8K5Q8NH50 307 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 RELTQ969Z4 430 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ECHDC3Q96DC8 303 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 TBC1D31Q96DN5 1066 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 DTD2Q96FN9 168 aa4.82□□□□□ -1.64
SDCBP-207ENST00000520168 ZDHHC12Q96GR4 267 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms