RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ACACAQ13085 2346 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 OR51F1A6NGY5 319 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 OR2AG2A6NM03 316 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 C2orf81A6NN90 581 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 RHPN2P1A8MT19 583 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 VEGFDO43915 354 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 TCEA3O75764 348 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 BRAFP15056 766 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 PNLIPP16233 465 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 MPSTP25325 297 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 RPL10P27635 214 aaKnown RBP13.11□□□□□ -0.31
VEGFA-219ENST00000518824 CD1CP29017 333 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 STIP1P31948 543 aaKnown RBP13.11□□□□□ -0.31
VEGFA-219ENST00000518824 NFATC2Q13469 925 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 SEPT6Q14141 434 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 NR1D2Q14995 579 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 LONRF2Q1L5Z9 754 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 INSCQ1MX18 579 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-219ENST00000518824 TTC27Q6P3X3 843 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 FOXR1Q6PIV2 292 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 TMEM220Q6QAJ8 160 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 C19orf48Q6RUI8 117 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 FAM83HQ6ZRV2 1179 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-219ENST00000518824 TRAPPC5Q8IUR0 188 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 DDHD1Q8NEL9 900 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 OR6C4Q8NGE1 309 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 DTX3LQ8TDB6 740 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 COG1Q8WTW3 980 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 SGF29Q96ES7 293 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 CRELD1Q96HD1 420 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 FRMD8P1Q9BZ68 369 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-219ENST00000518824 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 ASCL3Q9NQ33 180 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 RAB6BQ9NRW1 208 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 ZNF624Q9P2J8 865 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-219ENST00000518824 PYCARDQ9ULZ3 195 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 WDR37Q9Y2I8 494 aa13.11□□□□□ -0.31
VEGFA-219ENST00000518824 URB1O60287 2271 aaKnown RBP13.11□□□□□ -0.31
VEGFA-219ENST00000518824 IGHV1OR21-1A0A087WYE8 117 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 KMOO15229 486 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 NRDCO43847 1150 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 F3P13726 295 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 PBLDP30039 288 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-219ENST00000518824 MC4RP32245 332 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 SLC19A1P41440 591 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 FASLGP48023 281 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 TERF1P54274 439 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 DRG2P55039 364 aaKnown RBP13.1□□□□□ -0.31
VEGFA-219ENST00000518824 INHBCP55103 352 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 ZFP36L1Q07352 338 aaKnown RBP13.1□□□□□ -0.31
VEGFA-219ENST00000518824 SEMA5AQ13591 1074 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 CLCA4Q14CN2 919 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 TRIP13Q15645 432 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-219ENST00000518824 ZDHHC20Q5W0Z9 365 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 SLITRK4Q8IW52 837 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 RASGEF1CQ8N431 466 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 LILRA3Q8N6C8 439 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-219ENST00000518824 UBE2Q2Q8WVN8 375 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 ZNF778Q96MU6 729 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 DCBLD2Q96PD2 775 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 TBC1D10AQ9BXI6 508 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 POLR1BQ9H9Y6 1135 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 NLE1Q9NVX2 485 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-219ENST00000518824 SMOXQ9NWM0 555 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 SLC2A6Q9UGQ3 507 aa13.1□□□□□ -0.31
VEGFA-219ENST00000518824 DRG1Q9Y295 367 aaKnown RBP13.1□□□□□ -0.31
VEGFA-219ENST00000518824 TCRBV7S3A2A0A539 114 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 OR52A4PA6NMU1 304 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 AGAP14A8MT82 685 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 ZNF185O15231 689 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 PPFIA2O75334 1257 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 POP7O75817 140 aaKnown RBP13.09□□□□□ -0.31
VEGFA-219ENST00000518824 ZNF189O75820 626 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-219ENST00000518824 SUN1O94901 812 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 CRTAMO95727 393 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 ITIH1P19827 911 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 ITPKBP27987 946 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 FDFT1P37268 417 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 ETV5P41161 510 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 LSSP48449 732 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 CLCNKAP51800 687 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 UBE2IP63279 158 aaKnown RBP13.09□□□□□ -0.31
VEGFA-219ENST00000518824 HHEXQ03014 270 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 ITGA9Q13797 1035 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 NFE2L1Q14494 772 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 C16orf72Q14CZ0 275 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 TBC1D25Q3MII6 688 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 FNBP1LQ5T0N5 605 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 DRICH1Q6PGQ1 229 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-219ENST00000518824 PIANPQ8IYJ0 282 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 CCDC89Q8N998 374 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 RCBTB1Q8NDN9 531 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 WDR48Q8TAF3 677 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
VEGFA-219ENST00000518824 CDKN2AIPNLQ96HQ2 116 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 PPP1R2P1Q96PQ5 205 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 TIMM29Q9BSF4 260 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 AP1M1Q9BXS5 423 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms