RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	CNPY3	Q9BT09	278 aa		10.31	□□□□□ -0.76
CLDND1-231	ENST00000515620	VPS16	Q9H269	839 aa		10.31	□□□□□ -0.76
CLDND1-231	ENST00000515620	NDST4	Q9H3R1	872 aa		10.31	□□□□□ -0.76
CLDND1-231	ENST00000515620	ARFGAP3	Q9NP61	516 aa		10.31	□□□□□ -0.76
CLDND1-231	ENST00000515620	POT1	Q9NUX5	634 aa		10.31	□□□□□ -0.76
CLDND1-231	ENST00000515620	C5AR2	Q9P296	337 aa		10.31	□□□□□ -0.76
CLDND1-231	ENST00000515620	DNAJC16	Q9Y2G8	782 aa		10.31	□□□□□ -0.76
CLDND1-231	ENST00000515620	SIGLEC16	A6NMB1	481 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	OR52A4P	A6NMU1	304 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	PES1	O00541	588 aa	Known RBP	10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	NUAK1	O60285	661 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	ALPP	P05187	535 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	CALB1	P05937	261 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	PRKCSH	P14314	528 aa	Predicted RBP	10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	ZNF8	P17098	575 aa	Predicted RBP	10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	GLRB	P48167	497 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	ARL4D	P49703	201 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	CLCNKA	P51800	687 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	EPHB1	P54762	984 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	ACY1	Q03154	408 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	LLGL1	Q15334	1064 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	GPR19	Q15760	415 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	INSC	Q1MX18	579 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	TDRD12	Q587J7	1177 aa	Known RBP	10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	CRB2	Q5IJ48	1285 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	MIIP	Q5JXC2	388 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	ZNF648	Q5T619	568 aa	Predicted RBP	10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	HGSNAT	Q68CP4	663 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	LCN10	Q6JVE6	187 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	TRIM72	Q6ZMU5	477 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	ZNF517	Q6ZMY9	492 aa	Predicted RBP	10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	NLRP8	Q86W28	1048 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	NDUFAF2	Q8N183	169 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	ZBTB2	Q8N680	514 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	SLC38A9	Q8NBW4	561 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	WDR24	Q96S15	920 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	PCDHB18P	Q96TA0	734 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	BARD1	Q99728	777 aa	Known RBP	10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	STK33	Q9BYT3	514 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	OR2AG1	Q9H205	316 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	CARD9	Q9H257	536 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	SLC40A1	Q9NP59	571 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	AGPAT4	Q9NRZ5	378 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	ATXN10	Q9UBB4	475 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	EPHA6	Q9UF33	1036 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	TCFL5	Q9UL49	500 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	PPIL1	Q9Y3C6	166 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	PCDHGA10	Q9Y5H3	936 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620	PCSK5	Q92824	1860 aa		10.3	□□□□□ -0.76
CLDND1-231	ENST00000515620		A0A0J9YYE9	177 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	E2F3	O00716	465 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	CLDN7	O95471	211 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	PEX11B	O96011	259 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	TRBC1	P01850	177 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	KLK3	P07288	261 aa	Predicted RBP	10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	SNRPB2	P08579	225 aa	Known RBP	10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	RAB40AL	P0C0E4	278 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	UNG	P13051	313 aa	Predicted RBP	10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	DES	P17661	470 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	ITGA3	P26006	1051 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	RPL10	P27635	214 aa	Known RBP	10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	DRG2	P55039	364 aa	Known RBP	10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	OGDH	Q02218	1023 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	VWA3B	Q502W6	1294 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	MON1B	Q7L1V2	547 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	CUZD1	Q86UP6	607 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	FJX1	Q86VR8	437 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	BPHL	Q86WA6	291 aa	Predicted RBP	10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	BBS5	Q8N3I7	341 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	CXorf40B	Q96DE9	158 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	POM121	Q96HA1	1249 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	MAP3K3	Q99759	626 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	SNRNP25	Q9BV90	132 aa	Known RBP	10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	NLN	Q9BYT8	704 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	RAB33B	Q9H082	229 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	OCEL1	Q9H607	264 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	FAM207A	Q9NSI2	230 aa	Predicted RBP	10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	SEMA5B	Q9P283	1151 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	COPG2	Q9UBF2	871 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	SLC23A2	Q9UGH3	650 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	ADGRG1	Q9Y653	693 aa		10.29	□□□□□ -0.76
CLDND1-231	ENST00000515620	TCRBV5S1A1T	A0A578	114 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	EIF3CL	B5ME19	914 aa	Known RBP	10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	MEN1	O00255	615 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	DIAPH2	O60879	1101 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	JCHAIN	P01591	159 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	BRAF	P15056	766 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	OTX2	P32243	289 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	CA5A	P35218	305 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	MMP13	P45452	471 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	GSDMD	P57764	484 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	TUBB4B	P68371	445 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	TUBB2A	Q13885	445 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	TPD52L1	Q16890	204 aa	Predicted RBP	10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	CLEC16A	Q2KHT3	1053 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	HSP90AA4P	Q58FG1	418 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	RALGPS1	Q5JS13	557 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms