RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 PKN3Q6P5Z2 889 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 VN1R5Q7Z5H4 357 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 FAM109AQ8N4B1 249 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 BEND7Q8N7W2 519 aaPredicted RBP12.71□□□□□ -0.37
SMAD1-215ENST00000515385 C1orf127Q8N9H9 656 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 PSD4Q8NDX1 1056 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 C3orf30Q96M34 536 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 PGLYRP2Q96PD5 576 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 GDF15Q99988 308 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 APOL4Q9BPW4 351 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 CCDC32Q9BV29 185 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 RPF1Q9H9Y2 349 aaKnown RBP12.71□□□□□ -0.37
SMAD1-215ENST00000515385 ZNF302Q9NR11 478 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 ADPRHL2Q9NX46 363 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 CCDC59Q9P031 241 aaKnown RBP12.71□□□□□ -0.37
SMAD1-215ENST00000515385 TEX51A0A1B0GUA7 166 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 KLRG2A4D1S0 409 aaPredicted RBP12.71□□□□□ -0.38
SMAD1-215ENST00000515385 HMX3A6NHT5 357 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 SHOXO15266 292 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 CAPN5O15484 640 aaPredicted RBP12.71□□□□□ -0.38
SMAD1-215ENST00000515385 CYP11A1P05108 521 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 PRKCBP05771 671 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 ALOX12P18054 663 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 CHRM3P20309 590 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 CLK1P49759 484 aaKnown RBP12.71□□□□□ -0.38
SMAD1-215ENST00000515385 SLC35A2P78381 396 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 NFKB2Q00653 900 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 OLIG2Q13516 323 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 RCAN2Q14206 197 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 CSHL1Q14406 222 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 ZNF460Q14592 562 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 SMU1Q2TAY7 513 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 ZNF678Q5SXM1 525 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 CLEC6AQ6EIG7 209 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 RBM23Q86U06 439 aaKnown RBP12.71□□□□□ -0.38
SMAD1-215ENST00000515385 PHYKPLQ8IUZ5 450 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 CCDC117Q8IWD4 279 aaPredicted RBP12.71□□□□□ -0.38
SMAD1-215ENST00000515385 SCUBE3Q8IX30 993 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.71□□□□□ -0.38
SMAD1-215ENST00000515385 PARP16Q8N5Y8 322 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 FAM83FQ8NEG4 500 aaPredicted RBP12.71□□□□□ -0.38
SMAD1-215ENST00000515385 RNF139Q8WU17 664 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 SEPT1Q8WYJ6 367 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 FCGR1BQ92637 280 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 ST6GAL2Q96JF0 529 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 UQCC2Q9BRT2 126 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 ERVK-18Q9QC07 812 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 GPSM3Q9Y4H4 160 aa12.71□□□□□ -0.38
SMAD1-215ENST00000515385 POLRMTO00411 1230 aaKnown RBP12.7□□□□□ -0.38
SMAD1-215ENST00000515385 UBFD1O14562 309 aaKnown RBP12.7□□□□□ -0.38
SMAD1-215ENST00000515385 STAU1O95793 577 aaKnown RBP12.7□□□□□ -0.38
SMAD1-215ENST00000515385 PAMP19021 973 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 PIGAP37287 484 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 SLC26A3P40879 764 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 AP2S1P53680 142 aaPredicted RBP12.7□□□□□ -0.38
SMAD1-215ENST00000515385 TARDBPQ13148 414 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMAD1-215ENST00000515385 MFSD10Q14728 455 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 INTS6LQ5JSJ4 861 aaKnown RBP12.7□□□□□ -0.38
SMAD1-215ENST00000515385 JADE1Q6IE81 842 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 RIOX2Q8IUF8 465 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 HID1Q8IV36 788 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 MFSD6LQ8IWD5 586 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 CPXCR1Q8N123 301 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 SPATA6LQ8N4H0 392 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 TMEM199Q8N511 208 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 CELF2-AS1Q8N7Q2 184 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 C2CD4AQ8NCU7 369 aaPredicted RBP12.7□□□□□ -0.38
SMAD1-215ENST00000515385 OR5K1Q8NHB7 308 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 SLC35F5Q8WV83 523 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 SLC38A4Q969I6 547 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 MARVELD3Q96A59 401 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 GAD1Q99259 594 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 MLPHQ9BV36 600 aaPredicted RBP12.7□□□□□ -0.38
SMAD1-215ENST00000515385 NUAK2Q9H093 628 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 SMOC2Q9H3U7 446 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 SMURF2Q9HAU4 748 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 CDHR5Q9HBB8 845 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 ATP13A2Q9NQ11 1180 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 NRBP2Q9NSY0 501 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 FBXL12Q9NXK8 326 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 MOSPD1Q9UJG1 213 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 ERVW-1Q9UQF0 538 aa12.7□□□□□ -0.38
SMAD1-215ENST00000515385 PRMT5O14744 637 aaPredicted RBP12.69□□□□□ -0.38
SMAD1-215ENST00000515385 BCKDKO14874 412 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 RGS10O43665 173 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 ZBTB7AO95365 584 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 CPB1P15086 417 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 CD36P16671 472 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 KCNA5P22460 613 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 CES1P23141 567 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 CD6P30203 668 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 RPS5P46782 204 aaKnown RBP12.69□□□□□ -0.38
SMAD1-215ENST00000515385 OR3A3P47888 321 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 IL5RAQ01344 420 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 RAD51Q06609 339 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
SMAD1-215ENST00000515385 ADHFE1Q8IWW8 467 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 EID3Q8N140 333 aa12.69□□□□□ -0.38
SMAD1-215ENST00000515385 IPCEF1Q8WWN9 437 aaPredicted RBP12.69□□□□□ -0.38
SMAD1-215ENST00000515385 TMCO6Q96DC7 493 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms