RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 APRTP07741 180 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 ALPPL2P10696 532 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 CTSEP14091 401 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 BPIP17213 487 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 ELK3P41970 407 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 SLCO1A2P46721 670 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 HK3P52790 923 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 EMP3P54852 163 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 CDK3Q00526 305 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 PDE1BQ01064 536 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 MSLNQ13421 630 aaPredicted RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 C1orf61Q13536 156 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 SPARCL1Q14515 664 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 ELOCQ15369 112 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 TAF1AQ15573 450 aaPredicted RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 ZSCAN26Q16670 478 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 ALG11Q2TAA5 492 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 PRRT3Q5FWE3 981 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 HENMT1Q5T8I9 393 aaKnown RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 N4BP2L1Q5TBK1 243 aaPredicted RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 PDPK2PQ6A1A2 396 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 DENND5AQ6IQ26 1287 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 PSAPL1Q6NUJ1 521 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 LRRC8BQ6P9F7 803 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 C3orf62Q6ZUJ4 267 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 ZNF771Q7L3S4 317 aaPredicted RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 RD3Q7Z3Z2 195 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 GLRX5Q86SX6 157 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 LINC00523Q86TU6 105 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 HEATR4Q86WZ0 1026 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 CCNJLQ8IV13 435 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 CYP4X1Q8N118 509 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 FSTL5Q8N475 847 aaPredicted RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 TTC30BQ8N4P2 665 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 TRAM1L1Q8N609 369 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 GPR26Q8NDV2 337 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 UHMK1Q8TAS1 419 aaKnown RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 DCAKDQ8WVC6 231 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 SLC44A1Q8WWI5 657 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 SCG3Q8WXD2 468 aaKnown RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 OR1E3Q8WZA6 343 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 ZNF317Q96PQ6 595 aaPredicted RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 CYTH2Q99418 400 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 EBNA1BP2Q99848 306 aaKnown RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 APOL2Q9BQE5 337 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 NAT9Q9BTE0 207 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 ZSCAN5AQ9BUG6 496 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 DUSP23Q9BVJ7 150 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 TCEAL2Q9H3H9 227 aaPredicted RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 BPIFA1Q9NP55 256 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 UCKL1Q9NWZ5 548 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 PSMC3IPQ9P2W1 217 aaPredicted RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 MOSPD1Q9UJG1 213 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 ZNF180Q9UJW8 692 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 CNOT6Q9ULM6 557 aaKnown RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 PNMA8BQ9ULN7 279 aaPredicted RBP8.25□□□□□ -1.09
CCL28-204ENST00000514421 BTBD3Q9Y2F9 522 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 DMXL1Q9Y485 3027 aa8.25□□□□□ -1.09
CCL28-204ENST00000514421 SPAARA0A1B0GVQ0 90 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 TCRBV9S1A1TA0A576 114 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 GMNCA6NCL1 334 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 LMO7DNF2Z398 122 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 YY2O15391 372 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 SIGLEC6O43699 453 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 USP12O75317 370 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 TRIM16O95361 564 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 ASMTLO95671 621 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 SOD1P00441 154 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 ANXA6P08133 673 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 GIMD1P0DJR0 217 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 CHN1P15882 459 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 TPH1P17752 444 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 LPOP22079 712 aaPredicted RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 SSTR1P30872 391 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 STX2P32856 288 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 DCDC1P59894 354 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 SIM1P81133 766 aaPredicted RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 SARNPP82979 210 aaKnown RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 OLIG2Q13516 323 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 BBS9Q3SYG4 887 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 LVRNQ6Q4G3 990 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 SH2D5Q6ZV89 423 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 GLT6D1Q7Z4J2 308 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 GKN2Q86XP6 184 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 RBFAQ8N0V3 343 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 TAB3Q8N5C8 712 aaPredicted RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 FAM181AQ8N9Y4 354 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 ZNF548Q8NEK5 533 aaPredicted RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 OR4C6Q8NH72 309 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 BAHD1Q8TBE0 780 aaPredicted RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 DENND1AQ8TEH3 1009 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 FBF1Q8TES7 1133 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 SCARF2Q96GP6 870 aaPredicted RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 COX14Q96I36 57 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 CNDP2Q96KP4 475 aaKnown RBP8.24□□□□□ -1.09
CCL28-204ENST00000514421 PLEKHG4BQ96PX9 1271 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 C19orf43Q9BQ61 176 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 SPATA16Q9BXB7 569 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 CLPBQ9H078 707 aa8.24□□□□□ -1.09
CCL28-204ENST00000514421 CAAP1Q9H8G2 361 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms