RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 SIGLEC16A6NMB1 481 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 OR52A4PA6NMU1 304 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 PES1O00541 588 aaKnown RBP10.3□□□□□ -0.76
CLDND1-227ENST00000513452 NUAK1O60285 661 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 ALPPP05187 535 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 CALB1P05937 261 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 PRKCSHP14314 528 aaPredicted RBP10.3□□□□□ -0.76
CLDND1-227ENST00000513452 ZNF8P17098 575 aaPredicted RBP10.3□□□□□ -0.76
CLDND1-227ENST00000513452 GLRBP48167 497 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 ARL4DP49703 201 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 CLCNKAP51800 687 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 EPHB1P54762 984 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 ACY1Q03154 408 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 LLGL1Q15334 1064 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 GPR19Q15760 415 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 INSCQ1MX18 579 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 TDRD12Q587J7 1177 aaKnown RBP10.3□□□□□ -0.76
CLDND1-227ENST00000513452 PPP6R3Q5H9R7 873 aaPredicted RBP10.3□□□□□ -0.76
CLDND1-227ENST00000513452 CRB2Q5IJ48 1285 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 MIIPQ5JXC2 388 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 ZNF648Q5T619 568 aaPredicted RBP10.3□□□□□ -0.76
CLDND1-227ENST00000513452 HGSNATQ68CP4 663 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 LCN10Q6JVE6 187 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 TRIM72Q6ZMU5 477 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 ZNF517Q6ZMY9 492 aaPredicted RBP10.3□□□□□ -0.76
CLDND1-227ENST00000513452 NLRP8Q86W28 1048 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 ELOA2Q8IYF1 753 aaPredicted RBP10.3□□□□□ -0.76
CLDND1-227ENST00000513452 NDUFAF2Q8N183 169 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 ZBTB2Q8N680 514 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 SLC38A9Q8NBW4 561 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 WDR24Q96S15 920 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 PCDHB18PQ96TA0 734 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 BARD1Q99728 777 aaKnown RBP10.3□□□□□ -0.76
CLDND1-227ENST00000513452 STK33Q9BYT3 514 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 OR2AG1Q9H205 316 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 CARD9Q9H257 536 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 SLC40A1Q9NP59 571 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 AGPAT4Q9NRZ5 378 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 ATXN10Q9UBB4 475 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 EPHA6Q9UF33 1036 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 TCFL5Q9UL49 500 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 PPIL1Q9Y3C6 166 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 PCDHGA10Q9Y5H3 936 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 PCSK5Q92824 1860 aa10.3□□□□□ -0.76
CLDND1-227ENST00000513452 A0A0J9YYE9 177 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 E2F3O00716 465 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 CLDN7O95471 211 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 PEX11BO96011 259 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 TRBC1P01850 177 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 KLK3P07288 261 aaPredicted RBP10.29□□□□□ -0.76
CLDND1-227ENST00000513452 SNRPB2P08579 225 aaKnown RBP10.29□□□□□ -0.76
CLDND1-227ENST00000513452 RAB40ALP0C0E4 278 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 UNGP13051 313 aaPredicted RBP10.29□□□□□ -0.76
CLDND1-227ENST00000513452 DESP17661 470 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 ITGA3P26006 1051 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 RPL10P27635 214 aaKnown RBP10.29□□□□□ -0.76
CLDND1-227ENST00000513452 DRG2P55039 364 aaKnown RBP10.29□□□□□ -0.76
CLDND1-227ENST00000513452 OGDHQ02218 1023 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 VWA3BQ502W6 1294 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 MON1BQ7L1V2 547 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 CUZD1Q86UP6 607 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 FJX1Q86VR8 437 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 BPHLQ86WA6 291 aaPredicted RBP10.29□□□□□ -0.76
CLDND1-227ENST00000513452 BBS5Q8N3I7 341 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 CXorf40BQ96DE9 158 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 POM121Q96HA1 1249 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 MAP3K3Q99759 626 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 SNRNP25Q9BV90 132 aaKnown RBP10.29□□□□□ -0.76
CLDND1-227ENST00000513452 NLNQ9BYT8 704 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 RAB33BQ9H082 229 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 FAM207AQ9NSI2 230 aaPredicted RBP10.29□□□□□ -0.76
CLDND1-227ENST00000513452 SEMA5BQ9P283 1151 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 COPG2Q9UBF2 871 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 SLC23A2Q9UGH3 650 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 ADGRG1Q9Y653 693 aa10.29□□□□□ -0.76
CLDND1-227ENST00000513452 TCRBV5S1A1TA0A578 114 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 EIF3CLB5ME19 914 aaKnown RBP10.28□□□□□ -0.76
CLDND1-227ENST00000513452 MEN1O00255 615 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 DIAPH2O60879 1101 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 JCHAINP01591 159 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 BRAFP15056 766 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 OTX2P32243 289 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 CA5AP35218 305 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 MMP13P45452 471 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 GSDMDP57764 484 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 TUBB4BP68371 445 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 TUBB2AQ13885 445 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 TPD52L1Q16890 204 aaPredicted RBP10.28□□□□□ -0.76
CLDND1-227ENST00000513452 CLEC16AQ2KHT3 1053 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 HSP90AA4PQ58FG1 418 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 RALGPS1Q5JS13 557 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 DNTTIP2Q5QJE6 756 aaKnown RBP10.28□□□□□ -0.76
CLDND1-227ENST00000513452 PLEKHS1Q5SXH7 462 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 HENMT1Q5T8I9 393 aaKnown RBP10.28□□□□□ -0.76
CLDND1-227ENST00000513452 PRAMEF17Q5VTA0 474 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 DCUN1D2Q6PH85 259 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 FAM198BQ6UWH4 519 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 KCNMB4Q86W47 210 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 PHF13Q86YI8 300 aaPredicted RBP10.28□□□□□ -0.76
CLDND1-227ENST00000513452 RBM12BQ8IXT5 1001 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms