RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 GJB6O95452 261 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 SRPRAP08240 638 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 PDHA1P08559 390 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 SLC7A1P30825 629 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 SSTR1P30872 391 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 CCR8P51685 355 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 PTPN5P54829 565 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 PKNOX1P55347 436 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 CYP4F2P78329 520 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ARSJQ5FYB0 599 aaPredicted RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 CHRDL2Q6WN34 429 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 DCAF4L2Q8NA75 395 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ZMIZ2Q8NF64 920 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 TMBIM4Q9HC24 238 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 THUMPD1Q9NXG2 353 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 B4GALT7Q9UBV7 327 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 PHF11Q9UIL8 331 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 RUVBL1Q9Y265 456 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 CAPN6Q9Y6Q1 641 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 FAM237AA0A1B0GTK4 181 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 E7ENQ6 273 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 TPP1O14773 563 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 FFAR3O14843 346 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 GPR42O15529 346 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 TGFB1I1O43294 461 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 KCNJ13O60928 360 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 SYNGR4O95473 234 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ABHD2P08910 425 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 DLDP09622 509 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 ACP5P13686 325 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ACADLP28330 430 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 MAPK10P53779 464 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 OVGP1Q12889 678 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 RUNX3Q13761 415 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 NDUFAF6Q330K2 333 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ARMCX4Q5H9R4 360 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ZBTB49Q6ZSB9 765 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 FAM81AQ8TBF8 368 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 EPS8L3Q8TE67 593 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 SMPDL3AQ92484 453 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ATOH1Q92858 354 aaPredicted RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 DNASE1L2Q92874 299 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 C9orf16Q9BUW7 83 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 UNKQ9C0B0 810 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 RMI1Q9H9A7 625 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 DDX28Q9NUL7 540 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 TAS2R14Q9NYV8 317 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 NDUFA13Q9P0J0 144 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 COL20A1Q9P218 1284 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 COG5Q9UP83 839 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 WTIPA6NIX2 430 aaPredicted RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 ZNF623O75123 536 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 KLHL18O94889 574 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 MT-CO1P00395 513 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 HRH2P25021 359 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 NTSR1P30989 418 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 RBPJQ06330 500 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 HKDC1Q2TB90 917 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 PTPN20Q4JDL3 420 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 SLC25A24Q6NUK1 477 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 MBOAT1Q6ZNC8 495 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 C12orf40Q86WS4 652 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 RAB43Q86YS6 212 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ZDHHC13Q8IUH4 622 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 SLC30A8Q8IWU4 369 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 C19orf18Q8NEA5 215 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ZCCHC10Q8TBK6 192 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 KCNV2Q8TDN2 545 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 HNRNPLLQ8WVV9 542 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 NCSTNQ92542 709 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 SEMA4DQ92854 862 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 WDR92Q96MX6 357 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 KXD1Q9BQD3 176 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 EFCAB11Q9BUY7 163 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 LRMDAQ9H2I8 198 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 RNF121Q9H920 327 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 PIH1D1Q9NWS0 290 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 MKL2Q9ULH7 1088 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 RAP2CQ9Y3L5 183 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 CASZ1Q86V15 1759 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 COL3A1P02461 1466 aaPredicted RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 PEX11AO75192 247 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 SNRPB2P08579 225 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 SHMT2P34897 504 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 GRK6P43250 576 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 MAGEA9P43362 315 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 CXCL12P48061 93 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 CLCN7P51798 805 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 CASP9P55211 416 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 CSNK2BP67870 215 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 CEP78Q5JTW2 689 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ARMC4Q5T2S8 1044 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 TSTD2Q5T7W7 516 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 PLEKHA7Q6IQ23 1121 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 DUS1LQ6P1R4 473 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 RHBDF2Q6PJF5 856 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ADGRG6Q86SQ4 1221 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 TREML1Q86YW5 311 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ZNF671Q8TAW3 534 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 TM9SF4Q92544 642 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms