RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 PGBD2Q6P3X8 592 aa10.52□□□□□ -0.73
NEK1-206ENST00000510533 RGL4Q8IZJ4 473 aa10.52□□□□□ -0.73
NEK1-206ENST00000510533 OR10G6Q8NH81 332 aa10.52□□□□□ -0.73
NEK1-206ENST00000510533 NODALQ96S42 347 aa10.52□□□□□ -0.73
NEK1-206ENST00000510533 ZNF214Q9UL59 606 aaPredicted RBP10.52□□□□□ -0.73
NEK1-206ENST00000510533 MRPS33Q9Y291 106 aaKnown RBP10.52□□□□□ -0.73
NEK1-206ENST00000510533 PCDHGB3Q9Y5G1 929 aa10.52□□□□□ -0.73
NEK1-206ENST00000510533 KRT33AO76009 404 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 MT-ND1P03886 318 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 IFNW1P05000 195 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 PTPN9P43378 593 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 HSF2Q03933 536 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 TAF10Q12962 218 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 PEX6Q13608 980 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 ZBTB6Q15916 424 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 FSTL4Q6MZW2 842 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 TATDN1Q6P1N9 297 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 CCDC36Q8IYA8 594 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 ZZZ3Q8IYH5 903 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 ZNF567Q8N184 647 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 SVOPLQ8N434 492 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 PPTC7Q8NI37 304 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 IRGQQ8WZA9 623 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 TBATAQ96M53 351 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 GATA5Q9BWX5 397 aaPredicted RBP10.51□□□□□ -0.73
NEK1-206ENST00000510533 RRAGCQ9HB90 399 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 MIOSQ9NXC5 875 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 SMIM35A0A1B0GVV1 85 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 E7ENX8 843 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 GRM6O15303 877 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 MPZL2O60487 215 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 ATG13O75143 517 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 CD48P09326 243 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 ICAM3P32942 547 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 SPAM1P38567 509 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 RPS6KA3P51812 740 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 ZNF132P52740 706 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 ARFIP1P53367 373 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 SMARCB1Q12824 385 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 CBX3Q13185 183 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 RTL4Q6ZR62 310 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 LDB1Q86U70 411 aaPredicted RBP10.51□□□□□ -0.73
NEK1-206ENST00000510533 PARGQ86W56 976 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 BEND7Q8N7W2 519 aaPredicted RBP10.51□□□□□ -0.73
NEK1-206ENST00000510533 UBR7Q8N806 425 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 XAGE5Q8WWM1 108 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 NDRG1Q92597 394 aaKnown RBP10.51□□□□□ -0.73
NEK1-206ENST00000510533 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 GSDMCQ9BYG8 508 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 GOLGA2P5Q9HBQ8 144 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 NECTIN3Q9NQS3 549 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 AGLP35573 1532 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 H3BM21 787 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 CACNB4O00305 520 aaPredicted RBP10.51□□□□□ -0.73
NEK1-206ENST00000510533 SLURP2P0DP57 97 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 S100GP29377 79 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 CYP4F8P98187 520 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 C2orf80Q0P641 193 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 RNASE12Q5GAN4 147 aaKnown RBP10.51□□□□□ -0.73
NEK1-206ENST00000510533 PAOXQ6QHF9 649 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 VSTM1Q6UX27 236 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 CHST15Q7LFX5 561 aaPredicted RBP10.51□□□□□ -0.73
NEK1-206ENST00000510533 TAF8Q7Z7C8 310 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 RNF208Q9H0X6 261 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 SLC25A51Q9H1U9 297 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 EQTNQ9NQ60 294 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 ARHGEF4Q9NR80 690 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 IMP3Q9NV31 184 aaKnown RBP10.51□□□□□ -0.73
NEK1-206ENST00000510533 CLEC4AQ9UMR7 237 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 SLC30A4O14863 429 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 AIREO43918 545 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 PPP1R11O60927 126 aaPredicted RBP10.51□□□□□ -0.73
NEK1-206ENST00000510533 COL6A1P12109 1028 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 YBEYP58557 167 aaPredicted RBP10.51□□□□□ -0.73
NEK1-206ENST00000510533 PPP2R2BQ00005 443 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 DSC2Q02487 901 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 TNFAIP8L3Q5GJ75 292 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 RALGPS1Q5JS13 557 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 DCST1Q5T197 706 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 BANPQ8N9N5 519 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 C11orf65Q8NCR3 313 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 GPR20Q99678 358 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 ST6GALNAC4Q9H4F1 302 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 GMIPQ9P107 970 aa10.51□□□□□ -0.73
NEK1-206ENST00000510533 SUCOQ9UBS9 1254 aaKnown RBP10.51□□□□□ -0.73
NEK1-206ENST00000510533 ADAMDEC1O15204 470 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 NPHS1O60500 1241 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 ANXA4P09525 319 aaPredicted RBP10.5□□□□□ -0.73
NEK1-206ENST00000510533 S100A1P23297 94 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 HSPA7P48741 367 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 GTF2H2Q13888 395 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 GTF2H2CQ6P1K8 395 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 ZNF563Q8TA94 476 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 CHCHD6Q9BRQ6 235 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 TTYH3Q9C0H2 523 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 SP140LQ9H930 580 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 PDE10AQ9Y233 779 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 ZNF879B4DU55 563 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 MAGEB3O15480 346 aa10.5□□□□□ -0.73
NEK1-206ENST00000510533 NDUFS2O75306 463 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms