RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 FAM189A2Q15884 450 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF829Q3KNS6 432 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-209ENST00000508871 C6orf10Q5SRN2 563 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 FAM182BQ5T319 152 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 SHEQ5VZ18 495 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM268Q5VZI3 342 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 PSRC1Q6PGN9 363 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-209ENST00000508871 MTSS1LQ765P7 747 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 RABEPKQ7Z6M1 372 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 TTLL6Q8N841 843 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 TRMT10AQ8TBZ6 339 aaKnown RBP3.9□□□□□ -1.79
NEDD4-209ENST00000508871 UBTD2Q8WUN7 234 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM171Q8WVE6 324 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 PEX13Q92968 403 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 POLE4Q9NR33 117 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 ARL8BQ9NVJ2 186 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 RAPGEFL1Q9UHV5 662 aa3.9□□□□□ -1.79
NEDD4-209ENST00000508871 NSFL1CQ9UNZ2 370 aaKnown RBP3.9□□□□□ -1.79
NEDD4-209ENST00000508871 AQP7P3A6NL99 342 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 KPNA3O00505 521 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 HTRA2O43464 458 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 LRRN2O75325 713 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TGM2P21980 687 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ACVR2AP27037 513 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 CD1BP29016 333 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TCF7P36402 384 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 LBX1P52954 281 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TUBA4AP68366 448 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PHC1P78364 1004 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 GPR19Q15760 415 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 USF2Q15853 346 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TATDN1Q6P1N9 297 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 USP37Q86T82 979 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 LDHDQ86WU2 507 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 BBS7Q8IWZ6 715 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TBC1D19Q8N5T2 526 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 CDYL2Q8N8U2 506 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ERMNQ8TAM6 284 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ZCCHC10Q8TBK6 192 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TRPC4APQ8TEL6 797 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 FIG4Q92562 907 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PINX1Q96BK5 328 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 C5orf30Q96GV9 206 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ITCHQ96J02 903 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 POP1Q99575 1024 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 NELFAQ9H3P2 528 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 SRPRBQ9Y5M8 271 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 A0A1B0GVL5 298 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 FANCGO15287 622 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PRAMEF2O60811 474 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 AHSA1O95433 338 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TTLL1O95922 423 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 GTF2E2P29084 291 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 CCT8P50990 548 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TAP2Q03519 686 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 LGALS3BPQ08380 585 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TROAPQ12815 778 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TYSND1Q2T9J0 566 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PCGF3Q3KNV8 242 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 IQCCQ4KMZ1 466 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PRAMEF8Q5VWM4 474 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PRAMEF7Q5VXH5 474 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PLCXD3Q63HM9 321 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 CYP4V2Q6ZWL3 525 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ACAD11Q709F0 780 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 SNX20Q7Z614 316 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ACOT1Q86TX2 421 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 Q8NFD4 153 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 RNASE11Q8TAA1 199 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 SCAMP5Q8TAC9 235 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 NEK9Q8TD19 979 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 OSCP1Q8WVF1 389 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ATXN2LQ8WWM7 1075 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ZBED3Q96IU2 234 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PDLIM2Q96JY6 352 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TECTBQ96PL2 329 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 NUP58Q9BVL2 599 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PRDM14Q9GZV8 571 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 HDHD2Q9H0R4 259 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 GORASP2Q9H8Y8 452 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TBC1D17Q9HA65 648 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PKD2L1Q9P0L9 805 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 RNF14Q9UBS8 474 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 SALL4Q9UJQ4 1053 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 AJAP1Q9UKB5 411 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 KCNMB2Q9Y691 235 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 MYPNQ86TC9 1320 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 COL4A5P29400 1685 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 NIPSNAP2O75323 286 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TOX4O94842 621 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF888P0CJ79 500 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 POU2F1P14859 743 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 MALP21145 153 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 GCLCP48506 637 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 MAN2A2P49641 1150 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TMED10P49755 219 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 SREBF2Q12772 1141 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PTPAQ15257 358 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TGFBIQ15582 683 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 CCDC6Q16204 474 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms