RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 L1RE1Q9UN81 338 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PMF1-BGLAPU3KQ54 211 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 NID2Q14112 1375 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CNOT1A5YKK6 2376 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 IGLON5A6NGN9 336 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CAPN14A8MX76 684 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 WNT7AO00755 349 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 LYPLA2O95372 231 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ERCC1P07992 297 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ME2P23368 584 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CMPK1P30085 196 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 HOXA9P31269 272 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 GJA4P35212 333 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CSNK1EP49674 416 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 BMPR2Q13873 1038 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SPARCL1Q14515 664 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF234Q14588 700 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PDK2Q15119 407 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TRIP10Q15642 601 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 WHAMMP3Q1A5X7 153 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 Q6ZVU0 165 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CYP4Z1Q86W10 505 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 NPAS3Q8IXF0 933 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TCEAL8Q8IYN2 117 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CMASQ8NFW8 434 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SHKBP1Q8TBC3 707 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 AGR3Q8TD06 166 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TAS1R2Q8TE23 839 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ZDHHC16Q969W1 377 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 MAP3K3Q99759 626 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 LINC00597Q9H2U6 94 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 USP29Q9HBJ7 922 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PNO1Q9NRX1 252 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CHST7Q9NS84 486 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RNF112Q9ULX5 631 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ALPK3Q96L96 1907 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 AHCTF1Q8WYP5 2266 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 MBLAC1A4D2B0 266 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TRIM64A6NGJ6 449 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 NOL4O94818 638 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CD2BP2O95400 341 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 FTCDO95954 541 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ERBB2P04626 1255 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CAPN1P07384 714 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 HNRNPA2B1P22626 353 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PON1P27169 355 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 LRPAP1P30533 357 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RRM2P31350 389 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SPRP35270 261 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SLC1A1P43005 524 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SLCO1A2P46721 670 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 HNMTP50135 292 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CLCN2P51788 898 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 BDH1Q02338 343 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 C1orf61Q13536 156 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SCARB2Q14108 478 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 LDLRAP1Q5SW96 308 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 NKAIN2Q5VXU1 208 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SLC25A24Q6NUK1 477 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ERN2Q76MJ5 926 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 NANOGNBQ7Z5D8 188 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 C14orf80Q86SX3 495 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PIGZQ86VD9 579 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 HORMAD1Q86X24 394 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM25Q86YD3 366 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PCYOX1LQ8NBM8 494 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC54Q8NEL0 328 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 OR6C4Q8NGE1 309 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SPATA20Q8TB22 786 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ZFAND2BQ8WV99 257 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SLC2A11Q9BYW1 496 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 GOLPH3Q9H4A6 298 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 DENND2DQ9H6A0 471 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 EPS8L2Q9H6S3 715 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 IARS2Q9NSE4 1012 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 MRGBPQ9NV56 204 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 EIF3LQ9Y262 564 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 LRCH1Q9Y2L9 728 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 DENND4AQ7Z401 1863 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 A0A1W2PQ67 120 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 KCNU1A8MYU2 1149 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CLDN4O14493 209 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PDPK1O15530 556 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SCN2BO60939 215 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RBMXL2O75526 392 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PDGFBP01127 241 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RPLP0P05388 317 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CXCR5P32302 372 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RAB28P51157 221 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 GUCA2AQ02747 115 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ABRQ12979 859 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 MS4A13Q5J8X5 152 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 PAGE2BQ5JRK9 111 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CERCAMQ5T4B2 595 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SYT13Q7L8C5 426 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF598Q86UK7 904 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CFAP206Q8IYR0 622 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ZADH2Q8N4Q0 377 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 SUN5Q8TC36 379 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 FIG4Q92562 907 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms