RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CACNA1BQ00975 2339 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 CFAP99D6REC4 459 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 E7EVH7 732 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 AP3B1O00203 1094 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 GAPDHSO14556 408 aaPredicted RBP19.59■□□□□ 0.73
SFXN1-209ENST00000508290 PPM1DO15297 605 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 SUN1O94901 812 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 IFNB1P01574 187 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 FGGP02679 453 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 ITGA2BP08514 1039 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 MSH3P20585 1137 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 ITGALP20701 1170 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 IDSP22304 550 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 PCBP4P57723 403 aaKnown RBP19.59■□□□□ 0.73
SFXN1-209ENST00000508290 DMPKQ09013 629 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 C3orf38Q5JPI3 329 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 CRTC3Q6UUV7 619 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 ABRAXAS1Q6UWZ7 409 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 LRRC69Q6ZNQ3 347 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 ZNF547Q8IVP9 402 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 RBM12BQ8IXT5 1001 aaKnown RBP19.59■□□□□ 0.73
SFXN1-209ENST00000508290 OR10G6Q8NH81 332 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 C1orf54Q8WWF1 131 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 PATE1Q8WXA2 126 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 CCDC97Q96F63 343 aaPredicted RBP19.59■□□□□ 0.73
SFXN1-209ENST00000508290 SLC46A1Q96NT5 459 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 NAP1L3Q99457 506 aaPredicted RBP19.59■□□□□ 0.73
SFXN1-209ENST00000508290 CMKLR1Q99788 373 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 OSGEPL1Q9H4B0 414 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 ASB8Q9H765 288 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 EPB41L5Q9HCM4 733 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 ARFGAP3Q9NP61 516 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 SCN8AQ9UQD0 1980 aa19.59■□□□□ 0.73
SFXN1-209ENST00000508290 ASXL3Q9C0F0 2248 aa19.58■□□□□ 0.73
SFXN1-209ENST00000508290 IGHV1OR21-1A0A087WYE8 117 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 PRR19A6NJB7 356 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 PLD2O14939 933 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 HGSO14964 777 aaPredicted RBP19.58■□□□□ 0.72
SFXN1-209ENST00000508290 B4GAT1O43505 415 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 LDB2O43679 373 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 BUD23O43709 281 aaKnown RBP19.58■□□□□ 0.72
SFXN1-209ENST00000508290 DUX1O43812 170 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 SNX2O60749 519 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 MTX2O75431 263 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 XRCC1P18887 633 aaPredicted RBP19.58■□□□□ 0.72
SFXN1-209ENST00000508290 AKT1P31749 480 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 EIF2S3P41091 472 aaKnown RBP19.58■□□□□ 0.72
SFXN1-209ENST00000508290 LMAN1P49257 510 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 OR1D5P58170 312 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 SEMA5AQ13591 1074 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 SPARCL1Q14515 664 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 ZNF648Q5T619 568 aaPredicted RBP19.58■□□□□ 0.72
SFXN1-209ENST00000508290 RAB11FIP2Q7L804 512 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 SNX20Q7Z614 316 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 AMZ2Q86W34 360 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 SLITRK4Q8IW52 837 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 ZNF248Q8NDW4 579 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 OR4D9Q8NGE8 314 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 STYXQ8WUJ0 223 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 CPNE7Q9UBL6 633 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 FKBPLQ9UIM3 349 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 CRLS1Q9UJA2 301 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 SLC30A1Q9Y6M5 507 aa19.58■□□□□ 0.72
SFXN1-209ENST00000508290 LILRA5A6NI73 299 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 PDZK1P1A8MUH7 402 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 CEP104O60308 925 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 UGT1A9O60656 530 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 UGT1A6P19224 532 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 UGT1A1P22309 533 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 UGT1A4P22310 534 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 PSMA3P25788 255 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 CD1CP29017 333 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 UGT1A3P35503 534 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 UGT1A5P35504 534 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 HALP42357 657 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 XIAPP98170 497 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 SIX1Q15475 284 aaPredicted RBP19.57■□□□□ 0.72
SFXN1-209ENST00000508290 SKIDA1Q1XH10 827 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 KHDC1Q4VXA5 237 aaKnown RBP19.57■□□□□ 0.72
SFXN1-209ENST00000508290 C11orf96Q7Z7L8 435 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 FBXO39Q8N4B4 442 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 BEND7Q8N7W2 519 aaPredicted RBP19.57■□□□□ 0.72
SFXN1-209ENST00000508290 DNAAF3Q8N9W5 541 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 PEX13Q92968 403 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 DCUN1D1Q96GG9 259 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 AHCYL2Q96HN2 611 aaKnown RBP19.57■□□□□ 0.72
SFXN1-209ENST00000508290 PBKQ96KB5 322 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 B3GNT4Q9C0J1 378 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 UGT1A7Q9HAW7 530 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 UGT1A10Q9HAW8 530 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 UGT1A8Q9HAW9 530 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 ASCL3Q9NQ33 180 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 EIF2B3Q9NR50 452 aaKnown RBP19.57■□□□□ 0.72
SFXN1-209ENST00000508290 RAB6BQ9NRW1 208 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 POT1Q9NUX5 634 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 NLE1Q9NVX2 485 aaPredicted RBP19.57■□□□□ 0.72
SFXN1-209ENST00000508290 PCDHGA7Q9Y5G6 932 aa19.57■□□□□ 0.72
SFXN1-209ENST00000508290 APC2O95996 2303 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 OLIG2Q13516 323 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 SNX1Q13596 522 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms