RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 HOXD8P13378 290 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CD1DP15813 335 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 HDCP19113 662 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 MSH3P20585 1137 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CAPN3P20807 821 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CRHBPP24387 322 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 OXTRP30559 389 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SERPINB1P30740 379 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CCR1P32246 355 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 RYKP34925 604 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 HOXD12P35452 270 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 PCYT1AP49585 367 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 EIF2B2P49770 351 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 NDUFV1P49821 464 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CCR3P51677 355 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SUOXP51687 545 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 HNRNPFP52597 415 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 RAD23AP54725 363 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 WNT3AP56704 352 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 PITX1P78337 314 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 PRKG2Q13237 762 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 MAD2L1Q13257 205 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 BFSP2Q13515 415 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CAPRIN1Q14444 709 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SMU1Q2TAY7 513 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ATP6AP1LQ52LC2 224 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZC3H12BQ5HYM0 836 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 C6orf141Q5SZD1 244 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 RBM20Q5T481 1227 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 AGAP7PQ5VUJ5 663 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 AFMIDQ63HM1 303 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF385CQ66K41 422 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CLEC6AQ6EIG7 209 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 GLYATQ6IB77 296 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 NANOGP8Q6NSW7 305 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 TUBA3EQ6PEY2 450 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CRTC3Q6UUV7 619 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 KDELC1Q6UW63 502 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 PRR23CQ6ZRP0 262 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 HFE2Q6ZVN8 426 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ADCK1Q86TW2 530 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ISCA2Q86U28 154 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 OSTM1Q86WC4 334 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 METTL23Q86XA0 190 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ANKRD13BQ86YJ7 626 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 PHYKPLQ8IUZ5 450 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZC3H7AQ8IWR0 971 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 TP53INP2Q8IXH6 220 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 RIMKLAQ8IXN7 391 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 OFCC1Q8IZS5 231 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 EID3Q8N140 333 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 FBXO39Q8N4B4 442 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SPATA6LQ8N4H0 392 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 NKAPQ8N5F7 415 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC15A4Q8N697 577 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 PJA1Q8NG27 643 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 OR7A2PQ8NGA2 310 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 OR8J3Q8NGG0 315 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 OR56A4Q8NGH8 313 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 OR52E4Q8NGH9 312 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 OR9I1Q8NGQ6 314 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 OR6P1Q8NGX9 317 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SPATA22Q8NHS9 363 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ITFG1Q8TB96 612 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 GRIN3AQ8TCU5 1115 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SNX19Q92543 992 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 NDRG1Q92597 394 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 COPS5Q92905 334 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 MUL1Q969V5 352 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF566Q969W8 418 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 BIRC7Q96CA5 298 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 MOCOSQ96EN8 888 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 IMP4Q96G21 291 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SH3YL1Q96HL8 342 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CELF6Q96J87 481 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 BTN2A3PQ96KV6 586 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 RNF145Q96MT1 663 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 UCN2Q96RP3 112 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 NODALQ96S42 347 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMEM209Q96SK2 561 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZBTB18Q99592 522 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CGREF1Q99674 301 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC30A3Q99726 388 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 LPIN3Q9BQK8 851 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 NEURL2Q9BR09 285 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC39A3Q9BRY0 314 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 C16orf70Q9BSU1 422 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 C1QTNF3Q9BXJ4 246 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 DERL2Q9GZP9 239 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 MAGIXQ9H6Y5 334 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 RMND5AQ9H871 391 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 NANOGQ9H9S0 305 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ACSS2Q9NR19 701 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 PDGFCQ9NRA1 345 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ABCC13Q9NSE7 274 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SCN3BQ9NY72 215 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC2A6Q9UGQ3 507 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ENPP5Q9UJA9 477 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 DSEQ9UL01 958 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 RNF112Q9ULX5 631 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms