RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 C2P06681 752 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 FDXRP22570 491 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 HNRNPA2B1P22626 353 aaKnown RBP17.26■□□□□ 0.35
RNF4-209ENST00000507784 AKT2P31751 481 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 IGFALSP35858 605 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 CCR5P51681 352 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 ADARP55265 1226 aaKnown RBP17.26■□□□□ 0.35
RNF4-209ENST00000507784 PPP2R2AP63151 447 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 DMWDQ09019 674 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 KHDC1Q4VXA5 237 aaKnown RBP17.26■□□□□ 0.35
RNF4-209ENST00000507784 UGT3A1Q6NUS8 523 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 KDM7AQ6ZMT4 941 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 ACMSDQ8TDX5 336 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 SGF29Q96ES7 293 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 TSNARE1Q96NA8 513 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 GPR21Q99679 349 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 IQCGQ9H095 443 aaKnown RBP17.26■□□□□ 0.35
RNF4-209ENST00000507784 OR2AG1Q9H205 316 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 TRIM39Q9HCM9 518 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 PHPT1Q9NRX4 125 aaPredicted RBP17.26■□□□□ 0.35
RNF4-209ENST00000507784 TMEM98Q9Y2Y6 226 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 ACOT9Q9Y305 439 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 OR1A2Q9Y585 309 aa17.26■□□□□ 0.35
RNF4-209ENST00000507784 IGLV3-16A0A075B6K0 115 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 OR2AG2A6NM03 316 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 F8W8V4 182 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 POLR3GO15318 223 aaPredicted RBP17.25■□□□□ 0.35
RNF4-209ENST00000507784 CDK14O94921 469 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 NR1D1P20393 614 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 GMPRP36959 345 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 FNTBP49356 437 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 CLDN2P57739 230 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 CDK3Q00526 305 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 SLC18A2Q05940 514 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 PDE1CQ14123 709 aaPredicted RBP17.25■□□□□ 0.35
RNF4-209ENST00000507784 SEPT7Q16181 437 aaKnown RBP17.25■□□□□ 0.35
RNF4-209ENST00000507784 TMEM220Q6QAJ8 160 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 MAMSTRQ6ZN01 415 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 MACC1Q6ZN28 852 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 ADGRG6Q86SQ4 1221 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 PIM3Q86V86 326 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 SPNS2Q8IVW8 549 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 ANKRD42Q8N9B4 389 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 RASGEF1AQ8N9B8 481 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 ISL2Q96A47 359 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 ALKBH8Q96BT7 664 aaKnown RBP17.25■□□□□ 0.35
RNF4-209ENST00000507784 APOOQ9BUR5 198 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 ZCCHC2Q9C0B9 1178 aaKnown RBP17.25■□□□□ 0.35
RNF4-209ENST00000507784 WDR26Q9H7D7 661 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 GPAMQ9HCL2 828 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 GALPQ9UBC7 116 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 TRMT6Q9UJA5 497 aaKnown RBP17.25■□□□□ 0.35
RNF4-209ENST00000507784 CA5BQ9Y2D0 317 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 ANKRD6Q9Y2G4 727 aa17.25■□□□□ 0.35
RNF4-209ENST00000507784 OAS3Q9Y6K5 1087 aaKnown RBP17.25■□□□□ 0.35
RNF4-209ENST00000507784 A0A087X1B8 175 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 DNAJC6O75061 913 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 AP2A2O94973 939 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 IGHV4-34P06331 123 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 TEAD1P28347 426 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 CCNFP41002 786 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 MAGEA12P43365 314 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 CCT5P48643 541 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 IRF9Q00978 393 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 RPL6Q02878 288 aaKnown RBP17.24■□□□□ 0.35
RNF4-209ENST00000507784 CSTF1Q05048 431 aaKnown RBP17.24■□□□□ 0.35
RNF4-209ENST00000507784 SLC36A4Q6YBV0 504 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 TBC1D1Q86TI0 1168 aaPredicted RBP17.24■□□□□ 0.35
RNF4-209ENST00000507784 BANPQ8N9N5 519 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 SIDT2Q8NBJ9 832 aaKnown RBP17.24■□□□□ 0.35
RNF4-209ENST00000507784 DENND6BQ8NEG7 585 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 FAM76AQ8TAV0 307 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 LKAAEAR1Q8TD35 194 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 FUBP1Q96AE4 644 aaKnown RBP17.24■□□□□ 0.35
RNF4-209ENST00000507784 BIRC7Q96CA5 298 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 COX14Q96I36 57 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 APOPT1Q96IL0 206 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 PANX3Q96QZ0 392 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 TSSK1BQ9BXA7 367 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 LGR4Q9BXB1 951 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 TEX101Q9BY14 249 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 OGFRQ9NZT2 677 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 ATXN10Q9UBB4 475 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 DCDC2Q9UHG0 476 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 MBD1Q9UIS9 605 aaPredicted RBP17.24■□□□□ 0.35
RNF4-209ENST00000507784 SMG5Q9UPR3 1016 aaKnown RBP17.24■□□□□ 0.35
RNF4-209ENST00000507784 RUVBL2Q9Y230 463 aaKnown RBP17.24■□□□□ 0.35
RNF4-209ENST00000507784 COL6A3P12111 3177 aa17.24■□□□□ 0.35
RNF4-209ENST00000507784 TECTAO75443 2155 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 CEP192Q8TEP8 1941 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 EML5Q05BV3 1969 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 TMEM120BA0PK00 339 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 PRAMEF26H0Y7S4 382 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 CACNB4O00305 520 aaPredicted RBP17.23■□□□□ 0.35
RNF4-209ENST00000507784 LATO43561 262 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 VEGFDO43915 354 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 PBLDP30039 288 aaPredicted RBP17.23■□□□□ 0.35
RNF4-209ENST00000507784 ATP1A2P50993 1020 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 TIAL1Q01085 375 aaKnown RBP eCLIP17.23■□□□□ 0.35
RNF4-209ENST00000507784 ZKSCAN8Q15776 578 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms