RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PUM1Q14671 1186 aaKnown RBP eCLIP8.36□□□□□ -1.07
PDGFC-205ENST00000506880 TRIP13Q15645 432 aaPredicted RBP8.36□□□□□ -1.07
PDGFC-205ENST00000506880 CHRNA6Q15825 494 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 LPAL2Q16609 132 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 ALG11Q2TAA5 492 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 CERCAMQ5T4B2 595 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 GPRC6AQ5T6X5 926 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 DENND2CQ68D51 928 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 UGT3A1Q6NUS8 523 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 CASC4Q6P4E1 433 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 ZNF548Q8NEK5 533 aaPredicted RBP8.36□□□□□ -1.07
PDGFC-205ENST00000506880 GSDMBQ8TAX9 411 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 HDAC10Q969S8 669 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 ERLEC1Q96DZ1 483 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 APOL2Q9BQE5 337 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 BOCQ9BWV1 1114 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 CARD6Q9BX69 1037 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 FUT8Q9BYC5 575 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 PARD6AQ9NPB6 346 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 DNAJC28Q9NX36 388 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 DLL3Q9NYJ7 618 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 SMARCAL1Q9NZC9 954 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 GRHL1Q9NZI5 618 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 FETUBQ9UGM5 382 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 FKBPLQ9UIM3 349 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 METRNQ9UJH8 293 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 GNPTGQ9UJJ9 305 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 RPS6KL1Q9Y6S9 549 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 UNC13CQ8NB66 2214 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 ZCWPW2A0A1B0GU75 182 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 MGAT4DA6NG13 374 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 A8MX80 341 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 H0Y8X5 98 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 TMX2-CTNND1H3BSU7 103 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 K7ESM1 405 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 TM4SF5O14894 197 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 TP73O15350 636 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 CD3EAPO15446 510 aaKnown RBP8.35□□□□□ -1.07
PDGFC-205ENST00000506880 TNFSF14O43557 240 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 NUDT21O43809 227 aaKnown RBP8.35□□□□□ -1.07
PDGFC-205ENST00000506880 SLU7O95391 586 aaKnown RBP8.35□□□□□ -1.07
PDGFC-205ENST00000506880 PIRTP0C851 137 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 ACP1P24666 158 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 MGAT1P26572 445 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 PHBP35232 272 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 GRIA1P42261 906 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 FASLGP48023 281 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 ARCN1P48444 511 aaKnown RBP8.35□□□□□ -1.07
PDGFC-205ENST00000506880 C2orf54Q08AI8 447 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 SQSTM1Q13501 440 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 CRYMQ14894 314 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 NR1D2Q14995 579 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 C6orf132Q5T0Z8 1188 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 ANKRD22Q5VYY1 191 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 NEPROQ6NW34 567 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 ABRAXAS1Q6UWZ7 409 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 FAM151BQ6UXP7 276 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 NEK10Q6ZWH5 1172 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 ADGRG6Q86SQ4 1221 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 AMZ2Q86W34 360 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 C17orf82Q86X59 251 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-205ENST00000506880 CILP2Q8IUL8 1156 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 CARFQ8N187 725 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 DEFB119Q8N690 84 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 ARL10Q8N8L6 244 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 PLA2G15Q8NCC3 412 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 OR13C4Q8NGS5 318 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 OR6P1Q8NGX9 317 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 OR2L2Q8NH16 312 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 BAHD1Q8TBE0 780 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-205ENST00000506880 HM13Q8TCT9 377 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 PYROXD1Q8WU10 500 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 ANKRD7Q92527 254 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 KLK6Q92876 244 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 FMO2Q99518 471 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 LRRC1Q9BTT6 524 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-205ENST00000506880 CLPBQ9H078 707 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 FGF22Q9HCT0 170 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 FZD3Q9NPG1 666 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 CHRAC1Q9NRG0 131 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 SYBUQ9NX95 663 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 MOCS1Q9NZB8 636 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 ZC3H7BQ9UGR2 993 aaKnown RBP8.35□□□□□ -1.07
PDGFC-205ENST00000506880 SUFUQ9UMX1 484 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 DOLKQ9UPQ8 538 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 OR1A2Q9Y585 309 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 CACNA1AO00555 2505 aa8.35□□□□□ -1.07
PDGFC-205ENST00000506880 ASXL3Q9C0F0 2248 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 ATXN2Q99700 1313 aaKnown RBP8.34□□□□□ -1.07
PDGFC-205ENST00000506880 TCRBV7S3A2A0A539 114 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CCDC162PA2VCL2 907 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 FAM221BA6H8Z2 402 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 TMEM202A6NGA9 273 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 PATE3B3GLJ2 98 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CBFA2T3O75081 653 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 NDUFS3O75489 264 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 TCEA3O75764 348 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 ASMTLO95671 621 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 GOT2P00505 430 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms