RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 BRINP2Q9C0B6 783 aa16.96■□□□□ 0.3
SQSTM1-211ENST00000506690 CCDC90BQ9GZT6 254 aa16.96■□□□□ 0.3
SQSTM1-211ENST00000506690 TP63Q9H3D4 680 aaPredicted RBP16.96■□□□□ 0.3
SQSTM1-211ENST00000506690 SPC25Q9HBM1 224 aa16.96■□□□□ 0.3
SQSTM1-211ENST00000506690 SLCO3A1Q9UIG8 710 aa16.96■□□□□ 0.3
SQSTM1-211ENST00000506690 NOBOXO60393 691 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 SLC22A3O75751 556 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 UPK1BO75841 260 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 CD1DP15813 335 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 ALDH4A1P30038 563 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 CASP2P42575 452 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 NR4A2P43354 598 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 POLR2JP52435 117 aaKnown RBP16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 NKX2-5P52952 324 aaPredicted RBP16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 IST1P53990 364 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 CHRNB3Q05901 458 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 PRSS48Q7RTY5 328 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 P2RY8Q86VZ1 359 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 CILP2Q8IUL8 1156 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 LGI2Q8N0V4 545 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 LILRB4Q8NHJ6 448 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 FBLIM1Q8WUP2 373 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 RORBQ92753 470 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 EXT2Q93063 718 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 MRGPRX2Q96LB1 330 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 COLEC11Q9BWP8 271 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 SMOC2Q9H3U7 446 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 DSN1Q9H410 356 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 SNTG2Q9NY99 539 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 INTS6Q9UL03 887 aaKnown RBP16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 A0A1B0GTL3 188 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 LOC100130705A0A1B0GUX0 176 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 CLDN5O00501 218 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 SNPHO15079 494 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 MAN1A2O60476 641 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 KATNA1O75449 491 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 SEC24AO95486 1093 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 ANXA6P08133 673 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 MTHFD2P13995 350 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 INSRRP14616 1297 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 LSM3P62310 102 aaKnown RBP16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 SLX4IPQ5VYV7 408 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 PIM3Q86V86 326 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 RALGPS2Q86X27 583 aaPredicted RBP16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 GALNT13Q8IUC8 556 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 CLIP4Q8N3C7 705 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 B3GALNT2Q8NCR0 500 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 OR52K2Q8NGK3 314 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 PSMA8Q8TAA3 256 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 TNIP3Q96KP6 325 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 RBM4BQ9BQ04 359 aaKnown RBP16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 RBM4Q9BWF3 364 aaKnown RBP16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 FSD1LQ9BXM9 530 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 ATXN3LQ9H3M9 355 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 DDIT4Q9NX09 232 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 DNAJB9Q9UBS3 223 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 ZNF112Q9UJU3 913 aa16.95■□□□□ 0.3
SQSTM1-211ENST00000506690 YJEFN3A6XGL0 299 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 M0QX08 132 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 TNPO2O14787 897 aaKnown RBP16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 ASNA1O43681 348 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 PMPCBO75439 489 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 KCNK2O95069 426 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 GSNP06396 782 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 CD6P30203 668 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 RYKP34925 604 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 KIAA0319Q5VV43 1072 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 PAQR9Q6ZVX9 377 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 FKBP9P1Q75LS8 142 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 HS3ST5Q8IZT8 346 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 GABPB2Q8TAK5 448 aaPredicted RBP16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 HTRA1Q92743 480 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 CARS2Q9HA77 564 aaKnown RBP16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 UGT2A1Q9Y4X1 527 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 UNCXA6NJT0 531 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 PIRO00625 290 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 SOCS7O14512 581 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 DYRK3O43781 588 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 CNTN5O94779 1100 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 GGT1P19440 569 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 FSHRP23945 695 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 CARTPTQ16568 116 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 ANKRD34AQ69YU3 496 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 PM20D1Q6GTS8 502 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 CLEC20AQ6ZU45 233 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 LIMS2Q7Z4I7 341 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 RAB44Q7Z6P3 723 aaPredicted RBP16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 SVOPLQ8N434 492 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 DPP10Q8N608 796 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 CHAC2Q8WUX2 184 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 DACH2Q96NX9 599 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 ASPSCR1Q9BZE9 553 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 NOL6Q9H6R4 1146 aaKnown RBP16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 COMMD8Q9NX08 183 aa16.94■□□□□ 0.3
SQSTM1-211ENST00000506690 DFFAO00273 331 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 CHEK2O96017 543 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 IL12AP29459 219 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 NCS1P62166 190 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 DMPKQ09013 629 aa16.93■□□□□ 0.3
SQSTM1-211ENST00000506690 CDK5R2Q13319 367 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms