RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 PACRGLQ8N7B6 248 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 MFSD2AQ8NA29 543 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 FAM81AQ8TBF8 368 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 HM13Q8TCT9 377 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 LINC01599Q8WXQ3 324 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 RNF145Q96MT1 663 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 MAGEH1Q9H213 219 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 TIMMDC1Q9NPL8 285 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 AIG1Q9NVV5 245 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 AGO1Q9UL18 857 aaKnown RBP7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 COMMD10Q9Y6G5 202 aa7.55□□□□□ -1.2
PPARGC1A-204ENST00000506055 ANKRD66B4E2M5 251 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 E2F3O00716 465 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 SYN3O14994 580 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ACOX3O15254 700 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 INPPL1O15357 1258 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 CLOCKO15516 846 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ACSL4O60488 711 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 KATNA1O75449 491 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 VNN2O95498 520 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 TSPAN12O95859 305 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 C1RP00736 705 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 GPIP06744 558 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 PKMP14618 531 aaKnown RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ELNP15502 786 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 LPOP22079 712 aaPredicted RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 MYF6P23409 242 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 IL12AP29459 219 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ATP5C1P36542 298 aaKnown RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 RANBP1P43487 201 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 TTPAP49638 278 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 GATMP50440 423 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 SGSHP51688 502 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ERVK-8P63133 956 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 TUBA4AP68366 448 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 FOXM1Q08050 763 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 TWF1Q12792 350 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 PLCL1Q15111 1095 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ATP6AP1Q15904 470 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 AAK1Q2M2I8 961 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 SLC36A3Q495N2 470 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ATP6AP1LQ52LC2 224 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 C6orf136Q5SQH8 315 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 OTUD3Q5T2D3 398 aaPredicted RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 TMTC4Q5T4D3 741 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 IRAK1BP1Q5VVH5 260 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 OGFOD2Q6N063 350 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 SLC2A7Q6PXP3 512 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 GPRIN3Q6ZVF9 776 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 CLVS1Q8IUQ0 354 aaPredicted RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ERI1Q8IV48 349 aaKnown RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 OR56A4Q8NGH8 313 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 PROKR1Q8TCW9 393 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 PPM1MQ96MI6 270 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 PREBQ9HCU5 417 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 GKN1Q9NS71 199 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 EBF1Q9UH73 591 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 DNMT3LQ9UJW3 386 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 RAI2Q9Y5P3 530 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 A0A087WXM4 84 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 TMEM189-UBE2V1I3L0A0 370 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 STX16O14662 325 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 SCAMP3O14828 347 aaKnown RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 STX7O15400 261 aaKnown RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 KDELR3O43731 214 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 EEDO75530 441 aaKnown RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 RASAL1O95294 804 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 GJB5O95377 273 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 BMP10O95393 424 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 SNAP29O95721 258 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ALDH2P05091 517 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 PRR35P0CG20 571 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 RFC2P35250 354 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 SLC11A2P49281 568 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 KPNA1P52294 538 aaPredicted RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ERVPABLB-1P60509 514 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 HPCAP84074 193 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 PRKCZQ05513 592 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 TGFBIQ15582 683 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 AASDHQ4L235 1098 aaPredicted RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 XKR7Q5GH72 579 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 COQ5Q5HYK3 327 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 FAM26DQ5JW98 314 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 CTSL3PQ5NE16 218 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 RTP2Q5QGT7 225 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ALG1LQ6GMV1 187 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 TXNDC11Q6PKC3 985 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 IL27RAQ6UWB1 636 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ALDH16A1Q8IZ83 802 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 METTL6Q8TCB7 284 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 CD200R1Q8TD46 325 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 BIRC7Q96CA5 298 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 DCUN1D5Q9BTE7 237 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 CHID1Q9BWS9 393 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 TDRD1Q9BXT4 1180 aaKnown RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 RPF2Q9H7B2 306 aaKnown RBP7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 RIC8BQ9NVN3 520 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 ZMYM5Q9UJ78 669 aa7.54□□□□□ -1.2
PPARGC1A-204ENST00000506055 LEF1Q9UJU2 399 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms