RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 IDSP22304 550 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 HMGCLP35914 325 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 KCNC4Q03721 635 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 TMEM115Q12893 351 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 GTF2H3Q13889 308 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 FAM182AQ5T1J6 154 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 KAZNQ674X7 775 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 ABRAXAS1Q6UWZ7 409 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 SPOCD1Q6ZMY3 1216 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 TMEM26Q6ZUK4 368 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 RBM12BQ8IXT5 1001 aaKnown RBP11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 GDAP1Q8TB36 358 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 DTX3LQ8TDB6 740 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 BRSK1Q8TDC3 778 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 C9orf72Q96LT7 481 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 TTC25Q96NG3 672 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 CATSPER2Q96P56 530 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 VAT1Q99536 393 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 CTRCQ99895 268 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 SPRY4Q9C004 299 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 RBSNQ9H1K0 784 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 ADNPQ9H2P0 1102 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 GPN2Q9H9Y4 310 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 BPIFA1Q9NP55 256 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 POT1Q9NUX5 634 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 GEMIN8Q9NWZ8 242 aaKnown RBP11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 UBP1Q9NZI7 540 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 SAE1Q9UBE0 346 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 SLC23A2Q9UGH3 650 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 DNAJC16Q9Y2G8 782 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 SPO11Q9Y5K1 396 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 MN1Q10571 1320 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 GOLGA6L3A6NEY3 463 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 AURKAO14965 403 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 TOX3O15405 576 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 MTX2O75431 263 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 STK17BO94768 372 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 WISP1O95388 367 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 C9P02748 559 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 NFKB1P19838 968 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 SLC19A1P41440 591 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 MAGEA1P43355 309 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 HADHBP55084 474 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 WNT3AP56704 352 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 ABHD18Q0P651 414 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 WASHC5Q12768 1159 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 SEPT7Q16181 437 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 PLA2G4EQ3MJ16 856 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 ATP13A5Q4VNC0 1218 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 TFDP3Q5H9I0 405 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 AGAP9Q5VTM2 703 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 WASH2PQ6VEQ5 465 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 ATG14Q6ZNE5 492 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 PID1Q7Z2X4 250 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 RCOR2Q8IZ40 523 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 CXorf40BQ96DE9 158 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 SLC45A3Q96JT2 553 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 FCRL5Q96RD9 977 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 ZCCHC2Q9C0B9 1178 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 SLC25A18Q9H1K4 315 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 CLMPQ9H6B4 373 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 WASH6PQ9NQA3 447 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 HACD3Q9P035 362 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 SCHIP1Q9P0W5 487 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 KLHL8Q9P2G9 620 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 ZNF624Q9P2J8 865 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 TMEM184BQ9Y519 407 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 ALG6Q9Y672 507 aa11.87□□□□□ -0.51
PDLIM7-214ENST00000505746 UNC13CQ8NB66 2214 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 PRR19A6NJB7 356 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 HACD1B0YJ81 288 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 PECAM1P16284 738 aaPredicted RBP11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 TYRP1P17643 537 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 HLA-DPA1P20036 260 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 RPL10P27635 214 aaKnown RBP11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 CD68P34810 354 aaPredicted RBP11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 SPAM1P38567 509 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 HALP42357 657 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 CCR10P46092 362 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 MC1RQ01726 317 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 FOXM1Q08050 763 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 TBX2Q13207 712 aaPredicted RBP11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 MPP3Q13368 585 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 MAP7Q14244 749 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 CLCA4Q14CN2 919 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 KHDC1Q4VXA5 237 aaKnown RBP11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 SIRPB2Q5JXA9 342 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 KDELC1Q6UW63 502 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 ZC3H18Q86VM9 953 aaKnown RBP11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 TRAPPC5Q8IUR0 188 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 CCDC50Q8IVM0 306 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 ZNF547Q8IVP9 402 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 KATNAL2Q8IYT4 538 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 SLC25A41Q8N5S1 370 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 ESX1Q8N693 406 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 RNF214Q8ND24 703 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 RBM41Q96IZ5 413 aaKnown RBP11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 TGM7Q96PF1 710 aa11.86□□□□□ -0.51
PDLIM7-214ENST00000505746 FERMT1Q9BQL6 677 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms