RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 KXD1Q9BQD3 176 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 MGME1Q9BQP7 344 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 MMTAG2Q9BU76 263 aaKnown RBP5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 ABHD6Q9BV23 337 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 MRPL9Q9BYD2 267 aaKnown RBP5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 PCED1AQ9H1Q7 454 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 CHCHD3Q9NX63 227 aaKnown RBP5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 HEY2Q9UBP5 337 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 DNAJB9Q9UBS3 223 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 DNMBPQ6XZF7 1577 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 TARBP1Q13395 1621 aaKnown RBP5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 CHD1O14646 1710 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 A0A0B4J293 547 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 PSMD14O00487 310 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 HS3ST1O14792 307 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 RBMXL2O75526 392 aaKnown RBP5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 SOX30O94993 753 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 CYP1A2P05177 515 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 ATP6V1B1P15313 513 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 UGT1A1P22309 533 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 TCEA1P23193 301 aaKnown RBP5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 HRH2P25021 359 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 HSPA4P34932 840 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 RPL3P39023 403 aaKnown RBP5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 ENTPD1P49961 510 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 BMXP51813 675 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 CAPZA1P52907 286 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 TGFB2P61812 414 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 ZXDAP98168 799 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 RBPJQ06330 500 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 SCN1BQ07699 218 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 ZDHHC20Q5W0Z9 365 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 PLA2G4FQ68DD2 849 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 TMEM173Q86WV6 379 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 MAML2Q8IZL2 1156 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 ARFGAP1Q8N6T3 406 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 PCDH20Q8N6Y1 951 aaKnown RBP5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 SLC38A9Q8NBW4 561 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 C7orf57Q8NEG2 295 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 EXD1Q8NHP7 514 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 TBC1D16Q8TBP0 767 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 WDR20Q8TBZ3 569 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 KCNE4Q8WWG9 221 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 DDB2Q92466 427 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 RHBDF1Q96CC6 855 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 CCDC114Q96M63 670 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 MS4A10Q96PG2 267 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 EGFL8Q99944 293 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 FERMT1Q9BQL6 677 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 C17orf75Q9HAS0 396 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 SLC24A2Q9UI40 661 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 TINAGQ9UJW2 476 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 HS3ST3B1Q9Y662 390 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 IFT140Q96RY7 1462 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 EIF4G3O43432 1585 aaKnown RBP5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 RIMBP3CA6NJZ7 1639 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 RIMBP3BA6NNM3 1639 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 RIMBP3Q9UFD9 1639 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 ASTN2O75129 1339 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 RPGRIP1LQ68CZ1 1315 aa5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 ATXN2Q99700 1313 aaKnown RBP5.23□□□□□ -1.57
HMGB1P3-201ENST00000502802 ABCC8Q09428 1581 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 ANXA2P2A6NMY6 339 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 FAM90A26D6RGX4 464 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 J3QR06 171 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 VWA5AO00534 786 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 CYR61O00622 381 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 KCNN4O15554 427 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 BAG2O95816 211 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 HNRNPH2P55795 449 aaKnown RBP5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 TRAF1Q13077 416 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 PTGR1Q14914 329 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 VWC2Q2TAL6 325 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 ODF2Q5BJF6 829 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 OTUD1Q5VV17 481 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 PPP1R21Q6ZMI0 780 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 Q6ZTK2 550 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 IRF2BP2Q7Z5L9 587 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 ADGRG3Q86Y34 549 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 C16orf52Q8NHV5 167 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 RND1Q92730 232 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 CHFRQ96EP1 664 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 URB1-AS1Q96HZ7 61 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 ZNF558Q96NG5 402 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 KRTAP4-12Q9BQ66 201 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 PLAC1Q9HBJ0 212 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 NRIP3Q9NQ35 241 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 EQTNQ9NQ60 294 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 PRMT7Q9NVM4 692 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 MTRRQ9UBK8 725 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 B3GALT5Q9Y2C3 310 aa5.22□□□□□ -1.57
HMGB1P3-201ENST00000502802 TRIM64A6NGJ6 449 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 TRIM64BA6NI03 449 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 OR6C76A6NM76 312 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 BECN2A8MW95 431 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 H0YAE9 185 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 H0YGN5 161 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 ANKRD28O15084 1053 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 ASAP2O43150 1006 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 STX6O43752 255 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms