RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 EPHA3P29320 983 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ADRA1AP35348 466 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 NKX3-2P78367 333 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 PFKPQ01813 784 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ILF2Q12905 390 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 UGT8Q16880 541 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ANO4Q32M45 955 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 TCHHL1Q5QJ38 904 aaPredicted RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 C6orf10Q5SRN2 563 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 HLA-DQA1Q5Y7H0 255 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 SEL1L3Q68CR1 1132 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 PM20D1Q6GTS8 502 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 EFCAB12Q6NXP0 572 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 USP51Q70EK9 711 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 UBE2Q1Q7Z7E8 422 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ZAR1Q86SH2 424 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 CENPLQ8N0S6 344 aaPredicted RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 SVOPQ8N4V2 548 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ACVR1CQ8NER5 493 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 PPP1R14CQ8TAE6 165 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 FNDC8Q8TC99 324 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 SPPL2BQ8TCT7 592 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 FATE1Q969F0 183 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 HDAC11Q96DB2 347 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 CLMNQ96JQ2 1002 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 HNRNPABQ99729 332 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 GBA3Q9H227 469 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 RHOJQ9H4E5 214 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 SMOC1Q9H4F8 434 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 WDR41Q9HAD4 459 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 SLC6A20Q9NP91 592 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 NGRNQ9NPE2 291 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 TMEM45AQ9NWC5 275 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 CHCHD3Q9NX63 227 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 GULP1Q9UBP9 304 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 RSL24D1Q9UHA3 163 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 TUBD1Q9UJT1 453 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ZNF281Q9Y2X9 895 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 PCDHGB3Q9Y5G1 929 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 COPG1Q9Y678 874 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 SH3PXD2BA1X283 911 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 FAM181BA6NEQ2 426 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 TMEM221A6NGB7 291 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 WASH4PA8MWX3 477 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 C22orf46C9J442 243 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 F5H423 210 aaPredicted RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 PQBP1O60828 265 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 HSPA4LO95757 839 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 FYNP06241 537 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 CHRNGP07510 517 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 SLC35E2BP0CK96 405 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 GOT1P17174 413 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 TYRP1P17643 537 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ARF4P18085 180 aaPredicted RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 NCF2P19878 526 aaPredicted RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 HOXC13P31276 330 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 MLH1P40692 756 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 SLC5A3P53794 718 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ATXN1P54253 815 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 BCAT1P54687 386 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 MANFP55145 182 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 PSME3P61289 254 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 DCTN2Q13561 401 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 PEX6Q13608 980 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 SLC12A1Q13621 1099 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 SQLEQ14534 574 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 LY6KQ17RY6 165 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 DCAF4L1Q3SXM0 396 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ZBED5Q49AG3 693 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ARL13AQ5H913 290 aaPredicted RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 COQ5Q5HYK3 327 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 RAB41Q5JT25 222 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 PPM1LQ5SGD2 360 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 AFMIDQ63HM1 303 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ZNF385CQ66K41 422 aaPredicted RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 RWDD4Q6NW29 188 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 DCLRE1AQ6PJP8 1040 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 BEND5Q7L4P6 421 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 TRMT1LQ7Z2T5 733 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 MFSD6LQ8IWD5 586 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 C12orf29Q8N999 325 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ZNF420Q8TAQ5 688 aaPredicted RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 MIPOL1Q8TD10 442 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 RNF139Q8WU17 664 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 RSPH1Q8WYR4 309 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 RCN3Q96D15 328 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 NMD3Q96D46 503 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 PGBD4Q96DM1 585 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 AGAP3Q96P47 875 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 PLEKHG4BQ96PX9 1271 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 LGMNQ99538 433 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 LBHD1Q9BQE6 289 aaPredicted RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 TCHPQ9BT92 498 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 ACE2Q9BYF1 805 aaPredicted RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 ADAMTS10Q9H324 1103 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 DHX35Q9H5Z1 703 aaKnown RBP3.91□□□□□ -1.78
CLTC-209ENST00000498711 COQ10BQ9H8M1 238 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 PLGRKTQ9HBL7 147 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 TRPC7Q9HCX4 862 aa3.91□□□□□ -1.78
CLTC-209ENST00000498711 WDR6Q9NNW5 1121 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms