RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 RAB3IL1Q8TBN0 382 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 CD200R1Q8TD46 325 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 NAT14Q8WUY8 206 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 EEF1AKMT1Q8WVE0 214 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 BTN2A2Q8WVV5 523 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 GLYATL1Q969I3 302 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 GRAMD1AQ96CP6 724 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 CCDC97Q96F63 343 aaPredicted RBP7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 LINGO1Q96FE5 620 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 SHDQ96IW2 340 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 GPR78Q96P69 363 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 VPS35Q96QK1 796 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 PANX3Q96QZ0 392 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 ELAC2Q9BQ52 826 aaKnown RBP7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 ALG9Q9H6U8 611 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 PRDM6Q9NQX0 595 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 ARHGEF3Q9NR81 526 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 SPATS2LQ9NUQ6 558 aaKnown RBP7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 SMOXQ9NWM0 555 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 OXSMQ9NWU1 459 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 KCTD5Q9NXV2 234 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 SIRPGQ9P1W8 387 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 XPR1Q9UBH6 696 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 SERGEFQ9UGK8 458 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 TSR3Q9UJK0 312 aaKnown RBP7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 TMPRSS11EQ9UL52 423 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 MMP17Q9ULZ9 603 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 SCML1Q9UN30 329 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 DUSP12Q9UNI6 340 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 SORCS3Q9UPU3 1222 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 MRPS17Q9Y2R5 130 aaKnown RBP7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 DHRS7Q9Y394 339 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 LAMA3Q16787 3333 aa7.03□□□□□ -1.28
GPATCH4-209ENST00000498641 MYLKQ15746 1914 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 IGLV3-16A0A075B6K0 115 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TBC1D3DA0A087WVF3 549 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TBC1D3IA0A087WXS9 549 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TBC1D3EA0A087X179 549 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TBC1D3KA0A087X1G2 549 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 NPEPPSL1A6NEC2 478 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TBC1D3FA6NER0 549 aaPredicted RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TBC1D3LB9A6J9 549 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 BTN3A1O00481 513 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 STK25O00506 426 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 KLF11O14901 512 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 DLX3O60479 287 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TRIM13O60858 407 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 EDF1O60869 148 aaKnown RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 RNGTTO60942 597 aaKnown RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 H2AFYO75367 372 aaKnown RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 MTX2O75431 263 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 WISP3O95389 354 aaPredicted RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 FTH1P02794 183 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 SERPINE1P05121 402 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 PCCBP05166 539 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TBC1D3HP0C7X1 549 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TPBGLP0DKB5 382 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TROVE2P10155 538 aaKnown RBP eCLIP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 FGF3P11487 239 aaPredicted RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 GM2AP17900 193 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 DGKAP23743 735 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 ATP5F1P24539 256 aaPredicted RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 GRK2P25098 689 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 CLCN7P51798 805 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 PRKAA2P54646 552 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TAS2R38P59533 333 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 RPS21P63220 83 aaKnown RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 B4GALNT1Q00973 533 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 PRKCQQ04759 706 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 DPTQ07507 201 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 BST1Q10588 318 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 OVGP1Q12889 678 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 GTF2H3Q13889 308 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 CCINQ13939 588 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 UBXN2BQ14CS0 331 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TTLL9Q3SXZ7 439 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TECRLQ5HYJ1 363 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 ZNF648Q5T619 568 aaPredicted RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TBC1D3GQ6DHY5 549 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TBC1D3CQ6IPX1 549 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 ZCCHC23Q6ZST2 131 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 RAB44Q7Z6P3 723 aaPredicted RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 ISCA2Q86U28 154 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 CRLF3Q8IUI8 442 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 CPNE9Q8IYJ1 553 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TBC1D3Q8IZP1 549 aaPredicted RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 MYO1HQ8N1T3 1032 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 TMEM151AQ8N4L1 468 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 CCNYL1Q8N7R7 359 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 DDHD1Q8NEL9 900 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 FLCNQ8NFG4 579 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 STAG3L4Q8TBR4 150 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 PPP4R1Q8TF05 950 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 HMGB4Q8WW32 186 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 EXT2Q93063 718 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 CCDC126Q96EE4 140 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 SLC30A3Q99726 388 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 OSBPL6Q9BZF3 934 aa7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 ZCCHC2Q9C0B9 1178 aaKnown RBP7.02□□□□□ -1.29
GPATCH4-209ENST00000498641 DERL2Q9GZP9 239 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms