RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ACSL5Q9ULC5 683 aa3.2□□□□□ -1.9
PSPC1-205ENST00000497722 PDS5AQ29RF7 1337 aaKnown RBP3.19□□□□□ -1.9
PSPC1-205ENST00000497722 A0A1W2PQ09 198 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 C15orf62A8K5M9 175 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 A8MV72 311 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-205ENST00000497722 A8MZ25 164 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 WDR1O75083 606 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 STARD3NLO95772 234 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 CSH1P0DML2 217 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 CSH2P0DML3 217 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 CDH1P12830 882 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 MYOD1P15172 320 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 AMD1P17707 334 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 GABRB1P18505 474 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 S1PR1P21453 382 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 PON1P27169 355 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 UBA7P41226 1012 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 SLC15A1P46059 708 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 FASLGP48023 281 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 GPR143P51810 404 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 PPP2R2BQ00005 443 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 RELQ04864 619 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-205ENST00000497722 ZBTB17Q13105 803 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 GTF2H2Q13888 395 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 DECR1Q16698 335 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 SYT16Q17RD7 645 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 ASTE1Q2TB18 679 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-205ENST00000497722 PDSS1Q5T2R2 415 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 MFSD4BQ5TF39 518 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 SPATA1Q5VX52 437 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 C18orf63Q68DL7 685 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 JADE1Q6IE81 842 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 OR7E24Q6IFN5 339 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 ZNF280DQ6N043 979 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 GTF2H2CQ6P1K8 395 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 PAPD4Q6PIY7 484 aaKnown RBP3.19□□□□□ -1.9
PSPC1-205ENST00000497722 BRAT1Q6PJG6 821 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 GDPD4Q6W3E5 623 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 PLEKHM3Q6ZWE6 761 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 TUBA1AQ71U36 451 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 SLC9B2Q86UD5 537 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.19□□□□□ -1.9
PSPC1-205ENST00000497722 SCYL3Q8IZE3 742 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 SLC5A8Q8N695 610 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 IL17RCQ8NAC3 791 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 HJURPQ8NCD3 748 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-205ENST00000497722 ACVR1CQ8NER5 493 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 RDM1Q8NG50 284 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 THAP6Q8TBB0 222 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 ERLEC1Q96DZ1 483 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 TUBA1CQ9BQE3 449 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 NEURL2Q9BR09 285 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 SRSF8Q9BRL6 282 aaKnown RBP3.19□□□□□ -1.9
PSPC1-205ENST00000497722 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 MAGIXQ9H6Y5 334 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 FKRPQ9H9S5 495 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 LRRC4Q9HBW1 653 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 ABCF3Q9NUQ8 709 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 CPSF2Q9P2I0 782 aaKnown RBP3.19□□□□□ -1.9
PSPC1-205ENST00000497722 RPS6KA6Q9UK32 745 aa3.19□□□□□ -1.9
PSPC1-205ENST00000497722 FAF1Q9UNN5 650 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-205ENST00000497722 RSF1Q96T23 1441 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-205ENST00000497722 A0A0B4J293 547 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 C16orf97H3BN30 126 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 BMPR1BO00238 502 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 SMAD9O15198 467 aaKnown RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 ZNHIT1O43257 154 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 BUD23O43709 281 aaKnown RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 GH2P01242 217 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 IGLV2-11P01706 119 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 F7P08709 466 aaPredicted RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 VPREB1P12018 145 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 DGKAP23743 735 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 ACTN2P35609 894 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 GARSP41250 739 aaKnown RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 MLLT10P55197 1068 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 CLDN20P56880 219 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 TMF1P82094 1093 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 PLA2G7Q13093 441 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 ZNF234Q14588 700 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 MEA1Q16626 185 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 DUSP28Q4G0W2 176 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 PLEKHS1Q5SXH7 462 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 NSUN5P2Q63ZY6 315 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 ZNF704Q6ZNC4 412 aaPredicted RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 KCTD8Q6ZWB6 473 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 SMIM29Q86T20 159 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 CHERPQ8IWX8 916 aaKnown RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 ZNF441Q8N8Z8 693 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 POC5Q8NA72 575 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 DMBX1Q8NFW5 382 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 OR13A1Q8NGR1 328 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 SPATA20Q8TB22 786 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 SLC44A1Q8WWI5 657 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 ABTB1Q969K4 478 aaPredicted RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 OXNAD1Q96HP4 312 aaPredicted RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 HES6Q96HZ4 224 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 RSRC1Q96IZ7 334 aaKnown RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 ZNF583Q96ND8 569 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 OR2A14Q96R47 310 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms