RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 KIR2DS5Q14953 304 aa5.54□□□□□ -1.52
TARDBP-210ENST00000496840 TECRLQ5HYJ1 363 aa5.54□□□□□ -1.52
TARDBP-210ENST00000496840 LCE1FQ5T754 118 aa5.54□□□□□ -1.52
TARDBP-210ENST00000496840 SDCCAG8Q86SQ7 713 aaPredicted RBP5.54□□□□□ -1.52
TARDBP-210ENST00000496840 TSPAN33Q86UF1 283 aa5.54□□□□□ -1.52
TARDBP-210ENST00000496840 ARHGAP12Q8IWW6 846 aa5.54□□□□□ -1.52
TARDBP-210ENST00000496840 HACE1Q8IYU2 909 aa5.54□□□□□ -1.52
TARDBP-210ENST00000496840 STPG4Q8N801 248 aa5.54□□□□□ -1.52
TARDBP-210ENST00000496840 RBM15BQ8NDT2 890 aaKnown RBP5.54□□□□□ -1.52
TARDBP-210ENST00000496840 EGLN2Q96KS0 407 aa5.54□□□□□ -1.52
TARDBP-210ENST00000496840 POLR1BQ9H9Y6 1135 aa5.54□□□□□ -1.52
TARDBP-210ENST00000496840 LIMA1Q9UHB6 759 aaKnown RBP5.54□□□□□ -1.52
TARDBP-210ENST00000496840 KCNE2Q9Y6J6 123 aa5.54□□□□□ -1.52
TARDBP-210ENST00000496840 CCNDBP1O95273 360 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 NR2F2P24468 414 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 CTSCP53634 463 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 PLXDC2Q6UX71 529 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 GCSAMQ8N6F7 178 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 EMC1Q8N766 993 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 FRMD1Q8N878 549 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 PCYOX1LQ8NBM8 494 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 NAXEQ8NCW5 288 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 TRIM58Q8NG06 486 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 PPM1MQ96MI6 270 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 MTMR10Q9NXD2 777 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 ACAD8Q9UKU7 415 aa5.53□□□□□ -1.52
TARDBP-210ENST00000496840 H0YIN7 160 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 WISP2O76076 250 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 LRMPQ12912 555 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 NAB2Q15742 525 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 TBCEQ15813 527 aaPredicted RBP5.52□□□□□ -1.53
TARDBP-210ENST00000496840 PACS1Q6VY07 963 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 TRPT1Q86TN4 253 aaKnown RBP5.52□□□□□ -1.53
TARDBP-210ENST00000496840 LONP2Q86WA8 852 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 APLFQ8IW19 511 aaPredicted RBP5.52□□□□□ -1.53
TARDBP-210ENST00000496840 SLC5A8Q8N695 610 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 CTCFLQ8NI51 663 aaPredicted RBP5.52□□□□□ -1.53
TARDBP-210ENST00000496840 TRPC4APQ8TEL6 797 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 PPP4R1Q8TF05 950 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 SEMA3CQ99985 751 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 GFRA4Q9GZZ7 299 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 ZBTB20Q9HC78 741 aaPredicted RBP5.52□□□□□ -1.53
TARDBP-210ENST00000496840 EPB41L5Q9HCM4 733 aa5.52□□□□□ -1.53
TARDBP-210ENST00000496840 FAM237BA0A1B0GVD1 139 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 SCAMP1O15126 338 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 RTN3O95197 1032 aaPredicted RBP5.51□□□□□ -1.53
TARDBP-210ENST00000496840 KCNK5O95279 499 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 ERVK-10P10266 1014 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 CDH2P19022 906 aaPredicted RBP5.51□□□□□ -1.53
TARDBP-210ENST00000496840 ALDH4A1P30038 563 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 HOXC8P31273 242 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 C14orf177Q52M58 125 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 LRIF1Q5T3J3 769 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 GLDNQ6ZMI3 551 aaPredicted RBP5.51□□□□□ -1.53
TARDBP-210ENST00000496840 RASGEF1CQ8N431 466 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 FCAMRQ8WWV6 532 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 TMEM190Q8WZ59 177 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 WDFY2Q96P53 400 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 KRTAP4-4Q9BYR3 166 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 ARHGEF40Q8TER5 1519 aa5.51□□□□□ -1.53
TARDBP-210ENST00000496840 C15orf62A8K5M9 175 aa5.5□□□□□ -1.53
TARDBP-210ENST00000496840 NPHP1O15259 732 aa5.5□□□□□ -1.53
TARDBP-210ENST00000496840 CREB3O43889 395 aa5.5□□□□□ -1.53
TARDBP-210ENST00000496840 CAVIN2O95810 425 aa5.5□□□□□ -1.53
TARDBP-210ENST00000496840 EIF2S1P05198 315 aaKnown RBP5.5□□□□□ -1.53
TARDBP-210ENST00000496840 TFAP2AP05549 437 aa5.5□□□□□ -1.53
TARDBP-210ENST00000496840 HSPA1AP0DMV8 641 aaKnown RBP5.5□□□□□ -1.53
TARDBP-210ENST00000496840 HSPA1BP0DMV9 641 aaKnown RBP5.5□□□□□ -1.53
TARDBP-210ENST00000496840 RPS3AP61247 264 aaKnown RBP5.5□□□□□ -1.53
TARDBP-210ENST00000496840 MBTD1Q05BQ5 628 aa5.5□□□□□ -1.53
TARDBP-210ENST00000496840 TSTQ16762 297 aaKnown RBP5.5□□□□□ -1.53
TARDBP-210ENST00000496840 ZC2HC1CQ53FD0 456 aaPredicted RBP5.5□□□□□ -1.53
TARDBP-210ENST00000496840 MMS22LQ6ZRQ5 1243 aa5.5□□□□□ -1.53
TARDBP-210ENST00000496840 PAF1Q8N7H5 531 aa5.5□□□□□ -1.53
TARDBP-210ENST00000496840 ARHGEF2Q92974 986 aaKnown RBP5.5□□□□□ -1.53
TARDBP-210ENST00000496840 SMC6Q96SB8 1091 aa5.5□□□□□ -1.53
TARDBP-210ENST00000496840 TRPC7Q9HCX4 862 aa5.5□□□□□ -1.53
TARDBP-210ENST00000496840 EHD2Q9NZN4 543 aa5.5□□□□□ -1.53
TARDBP-210ENST00000496840 SMAD9O15198 467 aaKnown RBP5.49□□□□□ -1.53
TARDBP-210ENST00000496840 HIST1H2ABP04908 130 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 PRSS56P0CW18 603 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 HIST1H2ADP20671 130 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 ACADLP28330 430 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 GNB1P62873 340 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 MVPQ14764 893 aaKnown RBP5.49□□□□□ -1.53
TARDBP-210ENST00000496840 ASPRV1Q53RT3 343 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 ALFQ53S48 1182 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 NCEH1Q6PIU2 408 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 RBMS3Q6XE24 437 aaKnown RBP5.49□□□□□ -1.53
TARDBP-210ENST00000496840 ANO5Q75V66 913 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 HIST3H2AQ7L7L0 130 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 GBGT1Q8N5D6 347 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 OR8K5Q8NH50 307 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 TAF15Q92804 592 aaKnown RBP eCLIP5.49□□□□□ -1.53
TARDBP-210ENST00000496840 OXNAD1Q96HP4 312 aaPredicted RBP5.49□□□□□ -1.53
TARDBP-210ENST00000496840 C7orf26Q96N11 449 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 ASCL2Q99929 193 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 FSD1Q9BTV5 496 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 SLC52A3Q9NQ40 469 aa5.49□□□□□ -1.53
TARDBP-210ENST00000496840 RRP7BPQ9NSQ0 103 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms