RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ZDHHC5Q9C0B5 715 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 CLPBQ9H078 707 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 ERVMER34-1Q9H9K5 563 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 FGF22Q9HCT0 170 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 RABGEF1Q9UJ41 708 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 MOSPD1Q9UJG1 213 aa21.49■■□□□ 1.03
C9orf3-222ENST00000496567 QSOX1O00391 747 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 PRMT5O14744 637 aaPredicted RBP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 OR1I1O60431 355 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 AP2A2O94973 939 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 SYPP08247 313 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 CTSKP43235 329 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 BLKP51451 505 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 ADARP55265 1226 aaKnown RBP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 PPARDQ03181 441 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 ILF2Q12905 390 aaKnown RBP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 SLC29A2Q14542 456 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 KIF19Q2TAC6 998 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 UBAP2Q5T6F2 1119 aaKnown RBP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 MARK2Q7KZI7 788 aaKnown RBP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 OXR1Q8N573 874 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 RASGEF1AQ8N9B8 481 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 FBXO6Q9NRD1 293 aaPredicted RBP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 SMYD2Q9NRG4 433 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 TXNDC16Q9P2K2 825 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 GPR34Q9UPC5 381 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 DGKBQ9Y6T7 804 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 USP34Q70CQ2 3546 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 UBA6A0AVT1 1052 aaPredicted RBP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 PATE3B3GLJ2 98 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 KHNYNO15037 678 aaKnown RBP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 CHUKO15111 745 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 DNAJC6O75061 913 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 RASGRP1O95267 797 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 C1QAP02745 245 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 RPS3P23396 243 aaKnown RBP eCLIP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 MPP1Q00013 466 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 EIF2B5Q13144 721 aaKnown RBP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 ALG11Q2TAA5 492 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 KLHL38Q2WGJ6 581 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 IL27RAQ6UWB1 636 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 OR1E3Q8WZA6 343 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 LPGAT1Q92604 370 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 TSACCQ96A04 125 aaPredicted RBP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 CYP4F12Q9HCS2 524 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 MRPL40Q9NQ50 206 aaKnown RBP21.48■■□□□ 1.03
C9orf3-222ENST00000496567 SUFUQ9UMX1 484 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 PCDHB1Q9Y5F3 818 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 SNX11Q9Y5W9 270 aa21.48■■□□□ 1.03
C9orf3-222ENST00000496567 MUC6Q6W4X9 2439 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 CXorf49A8MYA2 514 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-222ENST00000496567 GRID2O43424 1007 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 TNFP01375 233 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 AHSGP02765 367 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 OR56A5P0C7T3 313 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 HK3P52790 923 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 GRIK2Q13002 908 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 TMEM220Q6QAJ8 160 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 DET1Q7L5Y6 550 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 RD3Q7Z3Z2 195 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 STRA8Q7Z7C7 330 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 LRRTM4Q86VH4 590 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 GALNT13Q8IUC8 556 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 TRAPPC5Q8IUR0 188 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 HID1Q8IV36 788 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 MREGQ8N565 214 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 PPM1NQ8N819 430 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 UHMK1Q8TAS1 419 aaKnown RBP21.47■■□□□ 1.03
C9orf3-222ENST00000496567 SGF29Q96ES7 293 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 CCDC97Q96F63 343 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-222ENST00000496567 PDXPQ96GD0 296 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 CPNE1Q99829 537 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 CCDC77Q9BR77 488 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 CCDC68Q9H2F9 335 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 EPB41L4BQ9H329 900 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 CARS2Q9HA77 564 aaKnown RBP21.47■■□□□ 1.03
C9orf3-222ENST00000496567 DNAJC28Q9NX36 388 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 SLC17A6Q9P2U8 582 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 NCDNQ9UBB6 729 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 ZNHIT2Q9UHR6 403 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 GNPTGQ9UJJ9 305 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 CRYL1Q9Y2S2 319 aa21.47■■□□□ 1.03
C9orf3-222ENST00000496567 PI4KAP42356 2102 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 OR2AG2A6NM03 316 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 PROB1E7EW31 1015 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 KMOO15229 486 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 DFNA5O60443 496 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 HAUS5O94927 633 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 ESR1P03372 595 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 CSF2P04141 144 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 HSD17B3P37058 310 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 GNPDA1P46926 289 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 CD151P48509 253 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 EIF3BP55884 814 aaKnown RBP21.46■■□□□ 1.03
C9orf3-222ENST00000496567 BNC1Q01954 994 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 BCL7AQ4VC05 210 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 ZNF789Q5FWF6 425 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 CLDN19Q8N6F1 224 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 HNRNPLLQ8WVV9 542 aaKnown RBP21.46■■□□□ 1.03
C9orf3-222ENST00000496567 SLC13A1Q9BZW2 595 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms