RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	ZNF765	Q7L2R6	523 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	PPP1R3B	Q86XI6	285 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	MCOLN2	Q8IZK6	566 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	BBS5	Q8N3I7	341 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	LPCAT1	Q8NF37	534 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	NSMCE1	Q8WV22	266 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	HSPH1	Q92598	858 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	ZNF653	Q96CK0	615 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	C19orf60	Q96EN9	201 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	AGPAT1	Q99943	283 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	SLC29A3	Q9BZD2	475 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	ING2	Q9H160	280 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	OR2AG1	Q9H205	316 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	EPB41L1	Q9H4G0	881 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	SLAMF7	Q9NQ25	335 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	DTL	Q9NZJ0	730 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	VPS18	Q9P253	973 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	ZNF624	Q9P2J8	865 aa	Predicted RBP	7.72	□□□□□ -1.17
NVL-223	ENST00000496393	ATXN10	Q9UBB4	475 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	TRIM10	Q9UDY6	481 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	CHKB	Q9Y259	395 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	SIK3	Q9Y2K2	1263 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	PCDHGA6	Q9Y5G7	932 aa		7.72	□□□□□ -1.17
NVL-223	ENST00000496393	C1orf232	A0A0U1RR37	186 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	OR52A4P	A6NMU1	304 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	EIF3CL	B5ME19	914 aa	Known RBP	7.71	□□□□□ -1.18
NVL-223	ENST00000496393	C21orf140	B9A014	251 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393		H3BRJ5	948 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	ZNF185	O15231	689 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	DDX3Y	O15523	660 aa	Known RBP	7.71	□□□□□ -1.18
NVL-223	ENST00000496393	NUAK1	O60285	661 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	FZD6	O60353	706 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	MTA2	O94776	668 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	LDLR	P01130	860 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	PYGL	P06737	847 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	EBLN1	P0CF75	366 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	FGF5	P12034	268 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	FOLR1	P15328	257 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	TCF4	P15884	667 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	POU3F2	P20265	443 aa	Predicted RBP	7.71	□□□□□ -1.18
NVL-223	ENST00000496393	EEF1G	P26641	437 aa	Known RBP	7.71	□□□□□ -1.18
NVL-223	ENST00000496393	RPL10	P27635	214 aa	Known RBP	7.71	□□□□□ -1.18
NVL-223	ENST00000496393	PTPN4	P29074	926 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	CAPZB	P47756	277 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	DRG2	P55039	364 aa	Known RBP	7.71	□□□□□ -1.18
NVL-223	ENST00000496393	MAMLD1	Q13495	774 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	KRT31	Q15323	416 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	CHRNA6	Q15825	494 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	INSC	Q1MX18	579 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
NVL-223	ENST00000496393	C1QL3	Q5VWW1	255 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	SLC6A19	Q695T7	634 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	TMCO3	Q6UWJ1	677 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	PRSS42	Q7Z5A4	293 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	NDUFAF2	Q8N183	169 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	FDCSP	Q8NFU4	85 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	LRRN4	Q8WUT4	740 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	MR1	Q95460	341 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	WDR24	Q96S15	920 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	EIF3C	Q99613	913 aa	Known RBP	7.71	□□□□□ -1.18
NVL-223	ENST00000496393	MLPH	Q9BV36	600 aa	Predicted RBP	7.71	□□□□□ -1.18
NVL-223	ENST00000496393	NUDT9	Q9BW91	350 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	ZWILCH	Q9H900	591 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
NVL-223	ENST00000496393	SLC23A2	Q9UGH3	650 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	RARRES3	Q9UL19	164 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	PCDHGA9	Q9Y5G4	932 aa	Known RBP	7.71	□□□□□ -1.18
NVL-223	ENST00000496393	C2CD3	Q4AC94	2353 aa		7.71	□□□□□ -1.18
NVL-223	ENST00000496393	CROCC	Q5TZA2	2017 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	IGHV5-51	A0A0C4DH38	117 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	ARHGAP10	A1A4S6	786 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	FAM181B	A6NEQ2	426 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	GOLGA6L3	A6NEY3	463 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	OR5K4	A6NMS3	321 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	LRCH4	O75427	683 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	MTX2	O75431	263 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	KRT38	O76015	456 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	RNF8	O76064	485 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	MT-ND3	P03897	115 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	ZNF30	P17039	623 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	NELFE	P18615	380 aa	Known RBP	7.7	□□□□□ -1.18
NVL-223	ENST00000496393	IL4R	P24394	825 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	IL1R2	P27930	398 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	ARL4A	P40617	200 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	SPINT3	P49223	89 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	CDH6	P55285	790 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	RPS15	P62841	145 aa	Known RBP	7.7	□□□□□ -1.18
NVL-223	ENST00000496393	GPR18	Q14330	331 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	ZNF569	Q5MCW4	686 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	FAM182A	Q5T1J6	154 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	FKBP15	Q5T1M5	1219 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	HENMT1	Q5T8I9	393 aa	Known RBP	7.7	□□□□□ -1.18
NVL-223	ENST00000496393	ACAD10	Q6JQN1	1059 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	SYVN1	Q86TM6	617 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	TICAM1	Q8IUC6	712 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	RBMXL3	Q8N7X1	1067 aa	Known RBP	7.7	□□□□□ -1.18
NVL-223	ENST00000496393	AVL9	Q8NBF6	648 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	SIDT2	Q8NBJ9	832 aa	Known RBP	7.7	□□□□□ -1.18
NVL-223	ENST00000496393	NEK11	Q8NG66	645 aa		7.7	□□□□□ -1.18
NVL-223	ENST00000496393	THAP4	Q8WY91	577 aa		7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms