RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PBX1P40424 430 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 SMSP52788 366 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 GSDMDP57764 484 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 ACY1Q03154 408 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 Q0VFX4 171 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 KIR2DS5Q14953 304 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 PYCR3Q53H96 274 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 DCAF10Q5QP82 559 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 B3GNTL1Q67FW5 361 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 IYDQ6PHW0 289 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 ZSWIM9Q86XI8 627 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 RELL1Q8IUW5 271 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 TMEM126BQ8IUX1 230 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 LZTR1Q8N653 840 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 PPP4R1Q8TF05 950 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 KAT5Q92993 513 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 CCDC47Q96A33 483 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 MFSD3Q96ES6 412 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 TUBGCP5Q96RT8 1024 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 NPY6RQ99463 290 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 FOXC2Q99958 501 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 NLNQ9BYT8 704 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 ZNF552Q9H707 407 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 SYNCQ9H7C4 482 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 ATP13A3Q9H7F0 1226 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 NDFIP2Q9NV92 336 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 CPNE7Q9UBL6 633 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 MAPK8IP1Q9UQF2 711 aa9.45□□□□□ -0.9
SMARCAL1-213ENST00000496037 OR5K4A6NMS3 321 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 CETN3O15182 167 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 KIF1CO43896 1103 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 SNX2O60749 519 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 LETM1O95202 739 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 IGHEP01854 428 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 F3P13726 295 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 TFE3P19532 575 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 AGAP20933 346 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 OTX2P32243 289 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 CA5AP35218 305 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 CAPZBP47756 277 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 ARCN1P48444 511 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 ARL4DP49703 201 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 CASP6P55212 293 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 SNX16P57768 344 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 POLR2LP62875 67 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 GPS2Q13227 327 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 ZNF169Q14929 603 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 FAM69BQ5VUD6 431 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 DENND2CQ68D51 928 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 IRGCQ6NXR0 463 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 SHC4Q6S5L8 630 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 OLFML1Q6UWY5 402 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 FAM92BQ6ZTR7 304 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 SLC26A9Q7LBE3 791 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 BIVMQ86UB2 503 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 CAMK1DQ8IU85 385 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 CNPY4Q8N129 248 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 SVIPQ8NHG7 77 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 KLHL6Q8WZ60 621 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 PGAP3Q96FM1 320 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 SCARF2Q96GP6 870 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 ZDHHC12Q96GR4 267 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 CNDP1Q96KN2 507 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 COQ10AQ96MF6 247 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 IP6K3Q96PC2 410 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 CPXM1Q96SM3 734 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 MLPHQ9BV36 600 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 CXXC4Q9H2H0 198 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 RETREG1Q9H6L5 497 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 SEMA3GQ9NS98 782 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 OGFRQ9NZT2 677 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 LHX3Q9UBR4 397 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 TBC1D29Q9UFV1 150 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 SH3BGRL2Q9UJC5 107 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 PADI2Q9Y2J8 665 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 TMEM98Q9Y2Y6 226 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 CSAG2Q9Y5P2 127 aa9.44□□□□□ -0.9
SMARCAL1-213ENST00000496037 STAB1Q9NY15 2570 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 PEX12O00623 359 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 SMAD7O15105 426 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 CUTAO60888 179 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 CLDN14O95500 239 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 RHOQP17081 205 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 TEAD1P28347 426 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 KIR3DL1P43629 444 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 GPR1P46091 355 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 SCTRP47872 440 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 IST1P53990 364 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 PSMA6P60900 246 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 SLC6A3Q01959 620 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 PTSQ03393 145 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 KCNAB1Q14722 419 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 NFKBIBQ15653 356 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 HIF1AQ16665 826 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 TMEM207Q6UWW9 146 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 GFRALQ6UXV0 394 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 MEX3BQ6ZN04 569 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 Q71RC1 249 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 RRAGAQ7L523 313 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms