RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CPSF2Q9P2I0 782 aaKnown RBP6.72□□□□□ -1.33
MSH5-217ENST00000494458 CD207Q9UJ71 328 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 IKZF3Q9UKT9 509 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 CNOT6Q9ULM6 557 aaKnown RBP6.72□□□□□ -1.33
MSH5-217ENST00000494458 TMCO1Q9UM00 188 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 SORCS3Q9UPU3 1222 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 RAP2CQ9Y3L5 183 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 ANTXRLA6NF34 631 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 ERICH4A6NGS2 130 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 GOLGA8CPA6NN73 597 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 CAPN14A8MX76 684 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 SLCO1B7G3V0H7 640 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 GPR39O43194 453 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 GRID2O43424 1007 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 NUAK1O60285 661 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 NIPSNAP2O75323 286 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 GPC4O75487 556 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 LYPLA1O75608 230 aaPredicted RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 DCTN3O75935 186 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 RHOBTB1O94844 696 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 APODP05090 189 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 TPBGLP0DKB5 382 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 HLA-EP13747 358 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 ADRB3P13945 408 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 ATP1B2P14415 290 aaPredicted RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 AOAHP28039 575 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 DRD3P35462 400 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 GLRBP48167 497 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 ARFIP2P53365 341 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 METAP1P53582 386 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 COPAP53621 1224 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 CORO7P57737 925 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 IL2P60568 153 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 HERVK_113P63132 956 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 IRX4P78413 519 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 OVGP1Q12889 678 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 PRKAA1Q13131 559 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 SMAD4Q13485 552 aaKnown RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 KRT72Q14CN4 511 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 PPP1R3AQ16821 1122 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 SPRED3Q2MJR0 410 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 UGT3A2Q3SY77 523 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 FNDC3BQ53EP0 1204 aaKnown RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 UNC50Q53HI1 259 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 ARL13AQ5H913 290 aaPredicted RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 PIP5KL1Q5T9C9 394 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 FAM46CQ5VWP2 391 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 EGFLAMQ63HQ2 1017 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 TTC23LQ6PF05 361 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 SBSNQ6UWP8 590 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 XKR5Q6UX68 686 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 TRIM67Q6ZTA4 783 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 FRMD7Q6ZUT3 714 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 Q6ZVL8 140 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 NEK10Q6ZWH5 1172 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 ERN2Q76MJ5 926 aaKnown RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 TAS2R42Q7RTR8 314 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 DSG4Q86SJ6 1040 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 KIRREL3Q8IZU9 778 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 SPATA6LQ8N4H0 392 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 SLC44A3Q8N4M1 653 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 CHCHD4Q8N4Q1 142 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 EEF1AKMT1Q8WVE0 214 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 SREK1Q8WXA9 508 aaKnown RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 DNASE1L2Q92874 299 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 PBXIP1Q96AQ6 731 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 MSANTD3Q96H12 275 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 PPP1R16AQ96I34 528 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 ASB2Q96Q27 587 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 COPS8Q99627 209 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 P2RY13Q9BPV8 354 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 ERVK-6Q9BXR3 956 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 FAM126AQ9BYI3 521 aaPredicted RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 CLPBQ9H078 707 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 ILKAPQ9H0C8 392 aaPredicted RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 CCDC68Q9H2F9 335 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 CHRDQ9H2X0 955 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 C8orf33Q9H7E9 229 aaPredicted RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 NPHS2Q9NP85 383 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 SAR1AQ9NR31 198 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 SPATS2LQ9NUQ6 558 aaKnown RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 ABCF3Q9NUQ8 709 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 PNPOQ9NVS9 261 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 NCKIPSDQ9NZQ3 722 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 VTI1BQ9UEU0 232 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 MBD1Q9UIS9 605 aaPredicted RBP6.71□□□□□ -1.34
MSH5-217ENST00000494458 GNPTGQ9UJJ9 305 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 CDYLQ9Y232 598 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 DNAJC16Q9Y2G8 782 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 FADS3Q9Y5Q0 445 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 STON1Q9Y6Q2 735 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 PLXNB3Q9ULL4 1909 aa6.71□□□□□ -1.34
MSH5-217ENST00000494458 PLXNA2O75051 1894 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 MYO9BQ13459 2157 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 A0A1W2PQF6 199 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 UBA6A0AVT1 1052 aaPredicted RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 NEMP2A6NFY4 417 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 SYCE1LA8MT33 242 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 FADS2P1A8MWK0 482 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 C2CD4DB7Z1M9 353 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms