RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ROPN1LQ96C74 230 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 GPR21Q99679 349 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 RBM4BQ9BQ04 359 aaKnown RBP19.01■□□□□ 0.63
COL27A1-207ENST00000494090 RBM4Q9BWF3 364 aaKnown RBP19.01■□□□□ 0.63
COL27A1-207ENST00000494090 CYP4F2P78329 520 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 CYP4F3Q08477 520 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 LIN52Q52LA3 116 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 DENND5AQ6IQ26 1287 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 DEF8Q6ZN54 512 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 OAFQ86UD1 273 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 PARGQ86W56 976 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 PLD4Q96BZ4 506 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 PPM1MQ96MI6 270 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 SSR3Q9UNL2 185 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 MON2Q7Z3U7 1717 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19■□□□□ 0.63
COL27A1-207ENST00000494090 GLTPD2A6NH11 291 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 BTBD19C9JJ37 291 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 STK16O75716 305 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 VNN1O95497 513 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 NMBRP28336 390 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 KLHL12Q53G59 568 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 C9orf64Q5T6V5 341 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 TSTD2Q5T7W7 516 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 THAP5Q7Z6K1 395 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 GJD3Q8N144 294 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 AGAP2Q99490 1192 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 ATXN10Q9UBB4 475 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 UGT2B17O75795 530 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 UGT2B4P06133 528 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 OLR1P78380 273 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 DSC2Q02487 901 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 TBATAQ96M53 351 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 BCL2L14Q9BZR8 327 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 ABCG8Q9H221 673 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 TIMMDC1Q9NPL8 285 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 M0R2N6 131 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 UROSP10746 265 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 CYP4B1P13584 511 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 NDST2P52849 883 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 C6orf52Q5T4I8 152 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 PTCHD4Q6ZW05 846 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 MIOSQ9NXC5 875 aa19■□□□□ 0.63
COL27A1-207ENST00000494090 MRPS17Q9Y2R5 130 aaKnown RBP19■□□□□ 0.63
COL27A1-207ENST00000494090 RBM47A0AV96 593 aaKnown RBP18.99■□□□□ 0.63
COL27A1-207ENST00000494090 GPIP06744 558 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 CREB1P16220 341 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 KIR3DL1P43629 444 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 MYBPC1Q00872 1141 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 RNF220Q5VTB9 566 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 NAT16Q8N8M0 369 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 OR10H5Q8NGA6 315 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 SPATA22Q8NHS9 363 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 OMA1Q96E52 524 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 MCRS1Q96EZ8 462 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 ZNF354BQ96LW1 612 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 TSSK3Q96PN8 268 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 ACSS2Q9NR19 701 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 MBD2Q9UBB5 411 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 HMGXB4Q9UGU5 601 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 SLC22A2O15244 555 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 KLHL18O94889 574 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 NADKO95544 446 aaPredicted RBP18.99■□□□□ 0.63
COL27A1-207ENST00000494090 PBX3P40426 434 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 LIPEQ05469 1076 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 SF1Q15637 639 aaKnown RBP18.99■□□□□ 0.63
COL27A1-207ENST00000494090 BEND5Q7L4P6 421 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 MTMR14Q8NCE2 650 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 SMPD3Q9NY59 655 aaPredicted RBP18.99■□□□□ 0.63
COL27A1-207ENST00000494090 TIMM22Q9Y584 194 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 POP4O95707 220 aaKnown RBP18.99■□□□□ 0.63
COL27A1-207ENST00000494090 SP100P23497 879 aaPredicted RBP18.99■□□□□ 0.63
COL27A1-207ENST00000494090 CAPGP40121 348 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 CCNYL2Q5T2Q4 361 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 CLEC6AQ6EIG7 209 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 FUT10Q6P4F1 479 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 RBM23Q86U06 439 aaKnown RBP18.99■□□□□ 0.63
COL27A1-207ENST00000494090 ATAD1Q8NBU5 361 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 COQ7Q99807 217 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 FAM83DQ9H4H8 585 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 ALOX5P09917 674 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 FSTL1Q12841 308 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 GALNT13Q8IUC8 556 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 FBXW11Q9UKB1 542 aa18.99■□□□□ 0.63
COL27A1-207ENST00000494090 EOMESO95936 686 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 IL12AP29459 219 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 OMPP47874 163 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 GNA12Q03113 381 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 QPRTQ15274 297 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 TAC4Q86UU9 113 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 UBR7Q8N806 425 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 GIPC3Q8TF64 312 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 RAPGEFL1Q9UHV5 662 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 AFDNP55196 1824 aaKnown RBP18.98■□□□□ 0.63
COL27A1-207ENST00000494090 ELOVL7A1L3X0 281 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 HAT1O14929 419 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 TMCC2O75069 709 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 LILRA4P59901 499 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 POU5F1Q01860 360 aaKnown RBP18.98■□□□□ 0.63
COL27A1-207ENST00000494090 NRG1Q02297 640 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms