RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CPNE6O95741 557 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 ALDH4A1P30038 563 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 FDFT1P37268 417 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 HADHAP40939 763 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 MLLT3P42568 568 aaPredicted RBP22.3■■□□□ 1.16
SNIP1-203ENST00000493916 ERVPABLB-1P60509 514 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 XIAPP98170 497 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 NFATC2Q13469 925 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 SQSTM1Q13501 440 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 SNX1Q13596 522 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 KIR2DS5Q14953 304 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 PLA2G4EQ3MJ16 856 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 MAP9Q49MG5 647 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 C11orf96Q7Z7L8 435 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 LINC00523Q86TU6 105 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 TRAPPC5Q8IUR0 188 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 SLITRK4Q8IW52 837 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 AVL9Q8NBF6 648 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 OR13C4Q8NGS5 318 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 FGF11Q92914 225 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 PRR11Q96HE9 360 aaPredicted RBP22.3■■□□□ 1.16
SNIP1-203ENST00000493916 TTC25Q96NG3 672 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 FOXP3Q9BZS1 431 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 STN1Q9H668 368 aaKnown RBP22.3■■□□□ 1.16
SNIP1-203ENST00000493916 EPB41L5Q9HCM4 733 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 ASCL3Q9NQ33 180 aa22.3■■□□□ 1.16
SNIP1-203ENST00000493916 AGAP14A8MT82 685 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 SNX2O60749 519 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 IFNB1P01574 187 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 FGGP02679 453 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 CD1CP29017 333 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 HHEXQ03014 270 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 SLC9B2Q86UD5 537 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 PIM3Q86V86 326 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 RASGEF1AQ8N9B8 481 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 OSGEPL1Q9H4B0 414 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 PRDM8Q9NQV8 689 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 CFAP47Q6ZTR5 3102 aa22.29■■□□□ 1.16
SNIP1-203ENST00000493916 TRBV23OR9-2A0A075B6M9 112 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 IGHV1OR21-1A0A087WYE8 117 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 KCNJ13O60928 360 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 SUN1O94901 812 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 VCLP18206 1134 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 GPLD1P80108 840 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 SEMA5AQ13591 1074 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 AMZ1Q400G9 498 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 WASH2PQ6VEQ5 465 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 TMPRSS9Q7Z410 1059 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 TAB3Q8N5C8 712 aaPredicted RBP22.28■■□□□ 1.16
SNIP1-203ENST00000493916 CCDC89Q8N998 374 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 TMEM159Q96B96 161 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 SH3KBP1Q96B97 665 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 ULK4Q96C45 1275 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 SLC46A1Q96NT5 459 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 ASB8Q9H765 288 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 ETNK1Q9HBU6 452 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 WASH6PQ9NQA3 447 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 KCNK4Q9NYG8 393 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 PAK5Q9P286 719 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 DRG1Q9Y295 367 aaKnown RBP22.28■■□□□ 1.16
SNIP1-203ENST00000493916 JRKLQ9Y4A0 524 aa22.28■■□□□ 1.16
SNIP1-203ENST00000493916 H7C0S8 307 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 CEP104O60308 925 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 MSH3P20585 1137 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 RBMS1P29558 406 aaKnown RBP22.27■■□□□ 1.16
SNIP1-203ENST00000493916 AKT1P31749 480 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 EIF2S3P41091 472 aaKnown RBP22.27■■□□□ 1.16
SNIP1-203ENST00000493916 CTSCP53634 463 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 UBE2IP63279 158 aaKnown RBP22.27■■□□□ 1.16
SNIP1-203ENST00000493916 DMPKQ09013 629 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 ACACAQ13085 2346 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 AGAP9Q5VTM2 703 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 RAB11FIP2Q7L804 512 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 ZNF514Q96K75 400 aaPredicted RBP22.27■■□□□ 1.16
SNIP1-203ENST00000493916 DNAJC1Q96KC8 554 aaKnown RBP22.27■■□□□ 1.16
SNIP1-203ENST00000493916 SLC38A3Q99624 504 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 DPYSL5Q9BPU6 564 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 KCNF1Q9H3M0 494 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 RDH14Q9HBH5 336 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 THSD1Q9NS62 852 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 NLE1Q9NVX2 485 aaPredicted RBP22.27■■□□□ 1.16
SNIP1-203ENST00000493916 CPNE7Q9UBL6 633 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 DNAJC16Q9Y2G8 782 aa22.27■■□□□ 1.16
SNIP1-203ENST00000493916 DNMT3AQ9Y6K1 912 aaPredicted RBP22.27■■□□□ 1.16
SNIP1-203ENST00000493916 PMS2P1A4D2B8 440 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 PLD2O14939 933 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 ITGA2BP08514 1039 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 ETS1P14921 441 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 TPH1P17752 444 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 ITGALP20701 1170 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 PSMA3P25788 255 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 CXCR5P32302 372 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 EPHA4P54764 986 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 TMPRSS15P98073 1019 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 CDH17Q12864 832 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 POU6F1Q14863 301 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 LONRF2Q1L5Z9 754 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 ABRAXAS1Q6UWZ7 409 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 SNX20Q7Z614 316 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 REXO1L1PQ8IX06 675 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms