RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 IVDP26440 423 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 NMBRP28336 390 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 ACADVLP49748 655 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 CTSCP53634 463 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 ACVR1Q04771 509 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 BIRC2Q13490 618 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 TUBB2AQ13885 445 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 MORF4L2Q15014 288 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 PLA2G4EQ3MJ16 856 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 FASTKD1Q53R41 847 aaKnown RBP13.78□□□□□ -0.2
CCM2-217ENST00000492883 FNBP1LQ5T0N5 605 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 OGFOD3Q6PK18 319 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 CES3Q6UWW8 571 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 MICALCLQ6ZW33 695 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 HOOK3Q86VS8 718 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 MPP5Q8N3R9 675 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 MFSD3Q96ES6 412 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 SGF29Q96ES7 293 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 SNF8Q96H20 258 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 ZNF514Q96K75 400 aaPredicted RBP13.78□□□□□ -0.2
CCM2-217ENST00000492883 TUBB2BQ9BVA1 445 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 OSGEPL1Q9H4B0 414 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 MRM3Q9HC36 420 aaKnown RBP13.78□□□□□ -0.2
CCM2-217ENST00000492883 KLC4Q9NSK0 619 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 TOR4AQ9NXH8 423 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 SOX13Q9UN79 622 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 DNAJC16Q9Y2G8 782 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 SNX24Q9Y343 169 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 MAD1L1Q9Y6D9 718 aa13.78□□□□□ -0.2
CCM2-217ENST00000492883 TRBV23OR9-2A0A075B6M9 112 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 TRBV5-4A0A0C4DH59 114 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 LY6G6EA0A0G2JKS1 128 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 EME2A4GXA9 379 aaPredicted RBP13.77□□□□□ -0.21
CCM2-217ENST00000492883 SMAPO00193 183 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 RAD51CO43502 376 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 TRIM16O95361 564 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 CDK4P11802 303 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 ATP1B2P14415 290 aaPredicted RBP13.77□□□□□ -0.21
CCM2-217ENST00000492883 PAMP19021 973 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 FOXN2P32314 431 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 PPARGP37231 505 aaPredicted RBP13.77□□□□□ -0.21
CCM2-217ENST00000492883 FOXC1Q12948 553 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 ILKQ13418 452 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 C14orf28Q4W4Y0 310 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 LYPLAL1Q5VWZ2 237 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 ARMC3Q5W041 872 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 GUSBP11Q6P575 273 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 EFL1Q7Z2Z2 1120 aaKnown RBP13.77□□□□□ -0.21
CCM2-217ENST00000492883 ZNF572Q7Z3I7 529 aaPredicted RBP13.77□□□□□ -0.21
CCM2-217ENST00000492883 AMZ2Q86W34 360 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 ZNF547Q8IVP9 402 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 PIANPQ8IYJ0 282 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 KYQ8NBH2 561 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 BBOF1Q8ND07 529 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 GPR156Q8NFN8 814 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 IFI44Q8TCB0 444 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 NAT6Q93015 286 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 ABCG4Q9H172 646 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 TREX1Q9NSU2 369 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 SLC23A2Q9UGH3 650 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 DNMT3AQ9Y6K1 912 aaPredicted RBP13.77□□□□□ -0.21
CCM2-217ENST00000492883 U3KQA8 63 aa13.77□□□□□ -0.21
CCM2-217ENST00000492883 FAM237BA0A1B0GVD1 139 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 NDC80O14777 642 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 NOBOXO60393 691 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 KCNJ13O60928 360 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 VAPBO95292 243 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 PBLDP30039 288 aaPredicted RBP13.76□□□□□ -0.21
CCM2-217ENST00000492883 ITGA8P53708 1063 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 B4GALNT1Q00973 533 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 E2F1Q01094 437 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 DBN1Q16643 649 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 DNAJC21Q5F1R6 531 aaKnown RBP13.76□□□□□ -0.21
CCM2-217ENST00000492883 HIBCHQ6NVY1 386 aaPredicted RBP13.76□□□□□ -0.21
CCM2-217ENST00000492883 DHRS13Q6UX07 377 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 CERS6Q6ZMG9 384 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 SFTPA2Q8IWL1 248 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 PDIK1LQ8N165 341 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 CHCHD4Q8N4Q1 142 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 OTUD6BQ8N6M0 293 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 BEND7Q8N7W2 519 aaPredicted RBP13.76□□□□□ -0.21
CCM2-217ENST00000492883 MNS1Q8NEH6 495 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 OR6C4Q8NGE1 309 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 NAT14Q8WUY8 206 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 ADAMTS14Q8WXS8 1223 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 SGSM3Q96HU1 749 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 ERP44Q9BS26 406 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 TIMM29Q9BSF4 260 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 CATSPERZQ9NTU4 200 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 TBC1D29Q9UFV1 150 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 UTP11Q9Y3A2 253 aaKnown RBP13.76□□□□□ -0.21
CCM2-217ENST00000492883 LRRK1Q38SD2 2015 aa13.76□□□□□ -0.21
CCM2-217ENST00000492883 CACNA1EQ15878 2313 aa13.75□□□□□ -0.21
CCM2-217ENST00000492883 PDZK1P1A8MUH7 402 aa13.75□□□□□ -0.21
CCM2-217ENST00000492883 CD3EAPO15446 510 aaKnown RBP13.75□□□□□ -0.21
CCM2-217ENST00000492883 SEC31AO94979 1220 aaKnown RBP13.75□□□□□ -0.21
CCM2-217ENST00000492883 GP1BAP07359 652 aa13.75□□□□□ -0.21
CCM2-217ENST00000492883 ADRB1P08588 477 aa13.75□□□□□ -0.21
CCM2-217ENST00000492883 SLC2A4P14672 509 aa13.75□□□□□ -0.21
CCM2-217ENST00000492883 GLB1P16278 677 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms