RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 IL22RA1Q8N6P7 574 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 GDAP1Q8TB36 358 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 KRT35Q92764 455 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 NKD1Q969G9 470 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 OXNAD1Q96HP4 312 aaPredicted RBP17.01■□□□□ 0.31
SGMS1-204ENST00000492601 MRGPRX2Q96LB1 330 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 SRPK1Q96SB4 655 aaKnown RBP17.01■□□□□ 0.31
SGMS1-204ENST00000492601 ARHGAP9Q9BRR9 750 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 HEMGNQ9BXL5 484 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.01■□□□□ 0.31
SGMS1-204ENST00000492601 PIKFYVEQ9Y2I7 2098 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 LOC285095A0A1B0GVY8 99 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 MTSS1O43312 755 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 LCA5LO95447 670 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 RPL10P27635 214 aaKnown RBP17■□□□□ 0.31
SGMS1-204ENST00000492601 TNNT3P45378 269 aaPredicted RBP17■□□□□ 0.31
SGMS1-204ENST00000492601 SPA17Q15506 151 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 PID1Q7Z2X4 250 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 ZNF547Q8IVP9 402 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 TRIM48Q8IWZ4 208 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 TTC30BQ8N4P2 665 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 BMPERQ8N8U9 685 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 IPMKQ8NFU5 416 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 BLOC1S5Q8TDH9 187 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 HTR3CQ8WXA8 447 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 QKIQ96PU8 341 aaKnown RBP eCLIP17■□□□□ 0.312e-6■■■■□ 19.5
SGMS1-204ENST00000492601 ASPSCR1Q9BZE9 553 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 C10orf88Q9H8K7 445 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 ZNF624Q9P2J8 865 aaPredicted RBP17■□□□□ 0.31
SGMS1-204ENST00000492601 TRIM10Q9UDY6 481 aa17■□□□□ 0.31
SGMS1-204ENST00000492601 B8ZZF3 427 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 BUD23O43709 281 aaKnown RBP16.99■□□□□ 0.31
SGMS1-204ENST00000492601 VEGFDO43915 354 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 VIPP01282 170 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 TYRP1P17643 537 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 HMGCLP35914 325 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 SLC19A1P41440 591 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 DRG2P55039 364 aaKnown RBP16.99■□□□□ 0.31
SGMS1-204ENST00000492601 GFERP55789 205 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 RAB15P59190 212 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 C11orf63Q6NUN7 778 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 FAM151BQ6UXP7 276 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 TMEM26Q6ZUK4 368 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 DAAM2Q86T65 1068 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 TRAPPC5Q8IUR0 188 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 CACNA2D3Q8IZS8 1091 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 AVL9Q8NBF6 648 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 RBM41Q96IZ5 413 aaKnown RBP16.99■□□□□ 0.31
SGMS1-204ENST00000492601 VPS35Q96QK1 796 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 FCRL5Q96RD9 977 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 TIMM29Q9BSF4 260 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 APMAPQ9HDC9 416 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 IL26Q9NPH9 171 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 RSPH14Q9UHP6 348 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.99■□□□□ 0.31
SGMS1-204ENST00000492601 SLC30A1Q9Y6M5 507 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 MYO18BQ8IUG5 2567 aa16.99■□□□□ 0.31
SGMS1-204ENST00000492601 LILRA5A6NI73 299 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 H7C0C1 242 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 GPR39O43194 453 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 UGT1A9O60656 530 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 RAD1O60671 282 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 ITGB2P05107 769 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 FAM87AP0C7U9 286 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 LIFP15018 202 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 XRCC1P18887 633 aaPredicted RBP16.98■□□□□ 0.31
SGMS1-204ENST00000492601 UGT1A6P19224 532 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 UGT1A1P22309 533 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 UGT1A4P22310 534 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 CYLC1P35663 651 aaPredicted RBP16.98■□□□□ 0.31
SGMS1-204ENST00000492601 ATP5OP48047 213 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 MC2RQ01718 297 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 TMEM115Q12893 351 aaPredicted RBP16.98■□□□□ 0.31
SGMS1-204ENST00000492601 GTF2H3Q13889 308 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 SLC1A5Q15758 541 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 CHRNA6Q15825 494 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 TBR1Q16650 682 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 CCDC181Q5TID7 509 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 BBS12Q6ZW61 710 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 GLT6D1Q7Z4J2 308 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 CCDC170Q8IYT3 715 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 RTP4Q96DX8 246 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 VAT1Q99536 393 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 EPB41L1Q9H4G0 881 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 TRABDQ9H4I3 376 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 UGT1A7Q9HAW7 530 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 UGT1A10Q9HAW8 530 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 UGT1A8Q9HAW9 530 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 OGFRQ9NZT2 677 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 IL17CQ9P0M4 197 aa16.98■□□□□ 0.31
SGMS1-204ENST00000492601 OR52A4PA6NMU1 304 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 HACD1B0YJ81 288 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 UBXN7O94888 489 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 EPOP01588 193 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 BRAFP15056 766 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 IDSP22304 550 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 RBL1P28749 1068 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 CA5AP35218 305 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 SPAM1P38567 509 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 NFATC3Q12968 1075 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms