RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TMEM52BQ4KMG9 183 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 SETMARQ53H47 684 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 LGSNQ5TDP6 509 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 ATG16L1Q676U5 607 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 ALG1LQ6GMV1 187 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 KIAA1161Q6NSJ0 714 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 IFT43Q96FT9 208 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 SMIM14Q96QK8 99 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 WRAP53Q9BUR4 548 aaKnown RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 C1QTNF2Q9BXJ5 285 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 NMUR2Q9GZQ4 415 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 FAM192AQ9GZU8 254 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 PDP2Q9P2J9 529 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 DMTF1Q9Y222 760 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 COQ6Q9Y2Z9 468 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 TCRBV7S3A2A0A539 114 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 A8MX80 341 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 B2RBV5 119 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 PRAMEF26H0Y7S4 382 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 NEMP1O14524 444 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 KRT37O76014 449 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 MMP2P08253 660 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 STIP1P31948 543 aaKnown RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 ELK3P41970 407 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 EIF3EP60228 445 aaKnown RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 RALGDSQ12967 914 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 TFDP2Q14188 446 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 PDK1Q15118 436 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 TBCCQ15814 346 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 DNAL1Q4LDG9 190 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 RNF220Q5VTB9 566 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 BRAT1Q6PJG6 821 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 GCNT7Q6ZNI0 430 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 NET1Q7Z628 596 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 SLC26A11Q86WA9 606 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 BBS5Q8N3I7 341 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 GATA6Q92908 595 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 PRR11Q96HE9 360 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 BMFQ96LC9 184 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 C7orf26Q96N11 449 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 NR1H4Q96RI1 486 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 RTKNQ9BST9 563 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 WWP1Q9H0M0 922 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 GAREM1Q9H706 876 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 C10orf88Q9H8K7 445 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 DNAAF2Q9NVR5 837 aaKnown RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 FNDC3AQ9Y2H6 1198 aaKnown RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 A0A0U1RQS6 177 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 FAM237BA0A1B0GVD1 139 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 POM121BA6NF01 834 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 FZD6O60353 706 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 RBP3P10745 1247 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 CD59P13987 128 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 TGM2P21980 687 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 HNRNPA2B1P22626 353 aaKnown RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 MMP12P39900 470 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 ATXN3P54252 364 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 AP2B1P63010 937 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 MTM1Q13496 603 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 TEAD4Q15561 434 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 SH2D5Q6ZV89 423 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 TAB3Q8N5C8 712 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 FAM71DQ8N9W8 422 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 MFSD2AQ8NA29 543 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 PDCD6IPQ8WUM4 868 aaKnown RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 SRPK1Q96SB4 655 aaKnown RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 FRMD8Q9BZ67 464 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 POLR1EQ9GZS1 481 aaKnown RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 ARMCX1Q9P291 453 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 TTLL3Q9Y4R7 772 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 PCDHB9Q9Y5E1 797 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 TEX264Q9Y6I9 313 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 TDRD6O60522 2096 aaKnown RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 TLR4O00206 839 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 SOCS5O75159 536 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 FAM155BO75949 473 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 PRLP01236 227 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 XPAP23025 273 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 NUDT1P36639 197 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 NR2C2P49116 596 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 NXPH1P58417 271 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 TMPRSS15P98073 1019 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 CDK18Q07002 472 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 BIRC2Q13490 618 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 PUM1Q14671 1186 aaKnown RBP eCLIP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 SHBQ15464 509 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 ZNF423Q2M1K9 1284 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 SCUBE1Q8IWY4 988 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 OR13H1Q8NG92 308 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 CXorf40AQ8TE69 158 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 PIH1D2Q8WWB5 315 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 GBP5Q96PP8 586 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 CCDC28BQ9BUN5 200 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 TRIM4Q9C037 500 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 ZDHHC5Q9C0B5 715 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 MBNL1Q9NR56 388 aaKnown RBP9.35□□□□□ -0.91
BRCA1-219ENST00000491747 SEPT10Q9P0V9 454 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 ZNF180Q9UJW8 692 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms