RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PCDHGA9Q9Y5G4 932 aaKnown RBP13.01□□□□□ -0.33
USF1-206ENST00000491629 PDZD2O15018 2839 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 SVILO95425 2214 aa13□□□□□ -0.33
USF1-206ENST00000491629 OR52A4PA6NMU1 304 aa13□□□□□ -0.33
USF1-206ENST00000491629 DDX3XO00571 662 aaKnown RBP eCLIP13□□□□□ -0.331e-6■■■□□ 18
USF1-206ENST00000491629 RASSF9O75901 435 aa13□□□□□ -0.33
USF1-206ENST00000491629 VIPP01282 170 aa13□□□□□ -0.33
USF1-206ENST00000491629 HLA-DQB2P05538 268 aa13□□□□□ -0.33
USF1-206ENST00000491629 CCNYL3P0C7X3 344 aa13□□□□□ -0.33
USF1-206ENST00000491629 AMD1P17707 334 aa13□□□□□ -0.33
USF1-206ENST00000491629 RPL10P27635 214 aaKnown RBP13□□□□□ -0.33
USF1-206ENST00000491629 CASP14P31944 242 aa13□□□□□ -0.33
USF1-206ENST00000491629 SLC25A11Q02978 314 aaKnown RBP13□□□□□ -0.33
USF1-206ENST00000491629 GPR18Q14330 331 aa13□□□□□ -0.33
USF1-206ENST00000491629 INPP5JQ15735 1006 aaPredicted RBP13□□□□□ -0.33
USF1-206ENST00000491629 SEPT7Q16181 437 aaKnown RBP13□□□□□ -0.33
USF1-206ENST00000491629 CRTC3Q6UUV7 619 aa13□□□□□ -0.33
USF1-206ENST00000491629 PPP1R3BQ86XI6 285 aa13□□□□□ -0.33
USF1-206ENST00000491629 PHYKPLQ8IUZ5 450 aa13□□□□□ -0.33
USF1-206ENST00000491629 NDUFAF2Q8N183 169 aa13□□□□□ -0.33
USF1-206ENST00000491629 GPR26Q8NDV2 337 aa13□□□□□ -0.33
USF1-206ENST00000491629 SLC41A2Q96JW4 573 aa13□□□□□ -0.33
USF1-206ENST00000491629 SLC25A23Q9BV35 468 aa13□□□□□ -0.33
USF1-206ENST00000491629 PCDH9Q9HC56 1237 aa13□□□□□ -0.33
USF1-206ENST00000491629 CASS4Q9NQ75 786 aa13□□□□□ -0.33
USF1-206ENST00000491629 EPHA6Q9UF33 1036 aa13□□□□□ -0.33
USF1-206ENST00000491629 ERRFI1Q9UJM3 462 aaPredicted RBP13□□□□□ -0.33
USF1-206ENST00000491629 TMPRSS11EQ9UL52 423 aa13□□□□□ -0.33
USF1-206ENST00000491629 WDR37Q9Y2I8 494 aa13□□□□□ -0.33
USF1-206ENST00000491629 CNTRLQ7Z7A1 2325 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 CELSR1Q9NYQ6 3014 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 ARGFXA6NJG6 315 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 ENO4A6NNW6 628 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 C21orf140B9A014 251 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 MATN3O15232 486 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 SNRNP200O75643 2136 aaKnown RBP12.99□□□□□ -0.33
USF1-206ENST00000491629 CEACAM4O75871 244 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 GZMAP12544 262 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 ZNF7P17097 686 aaPredicted RBP12.99□□□□□ -0.33
USF1-206ENST00000491629 PTPN4P29074 926 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 NOP2P46087 812 aaKnown RBP12.99□□□□□ -0.33
USF1-206ENST00000491629 CCL11P51671 97 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 ARSEP51690 589 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 PGDP52209 483 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 GALNT2Q10471 571 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 BOLA3Q53S33 107 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 FAM69BQ5VUD6 431 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 LCN10Q6JVE6 187 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 JMJD6Q6NYC1 403 aaPredicted RBP12.99□□□□□ -0.33
USF1-206ENST00000491629 ABRAXAS1Q6UWZ7 409 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 ZNF517Q6ZMY9 492 aaPredicted RBP12.99□□□□□ -0.33
USF1-206ENST00000491629 C11orf96Q7Z7L8 435 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 CPNE8Q86YQ8 564 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 SLC38A9Q8NBW4 561 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 FAM71BQ8TC56 605 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 ADAMTS17Q8TE56 1095 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 NSMCE1Q8WV22 266 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 ZNF653Q96CK0 615 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 C19orf60Q96EN9 201 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 BTBD6Q96KE9 485 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 RAB33BQ9H082 229 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 ING2Q9H160 280 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 HAUS4Q9H6D7 363 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 TRIM39Q9HCM9 518 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 RBM22Q9NW64 420 aaKnown RBP eCLIP12.99□□□□□ -0.33
USF1-206ENST00000491629 MYO1AQ9UBC5 1043 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 DNAJC16Q9Y2G8 782 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 C2CD3Q4AC94 2353 aa12.99□□□□□ -0.33
USF1-206ENST00000491629 NUP210LQ5VU65 1888 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 LRRC53A6NM62 1247 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 ANKRD66B4E2M5 251 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 MTX2O75431 263 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 LDLRP01130 860 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 TPM2P07951 284 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 EBLN1P0CF75 366 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 SERPINB6P35237 376 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 ANP32AP39687 249 aaKnown RBP12.98□□□□□ -0.33
USF1-206ENST00000491629 PTGIRP43119 386 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 DRG2P55039 364 aaKnown RBP12.98□□□□□ -0.33
USF1-206ENST00000491629 RPL26P61254 145 aaKnown RBP12.98□□□□□ -0.33
USF1-206ENST00000491629 TUBB3Q13509 450 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 ATP13A4Q4VNC1 1196 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 TDRD12Q587J7 1177 aaKnown RBP12.98□□□□□ -0.33
USF1-206ENST00000491629 ALS2CLQ60I27 953 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 NCBP2-AS2Q69YL0 99 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 IRGCQ6NXR0 463 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 MAMDC2Q7Z304 686 aaPredicted RBP12.98□□□□□ -0.33
USF1-206ENST00000491629 RBMXL3Q8N7X1 1067 aaKnown RBP12.98□□□□□ -0.33
USF1-206ENST00000491629 AVL9Q8NBF6 648 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 GPR150Q8NGU9 434 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 TEKT4Q8WW24 435 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 NUDT9Q9BW91 350 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 MFRPQ9BY79 579 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 PKD2L2Q9NZM6 624 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 DNPEPQ9ULA0 475 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 RPL26L1Q9UNX3 145 aaKnown RBP12.98□□□□□ -0.33
USF1-206ENST00000491629 PCM1Q15154 2024 aa12.98□□□□□ -0.33
USF1-206ENST00000491629 RGSL1A5PLK6 1076 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 PDZK1P1A8MUH7 402 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 SLC25A14O95258 325 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms